PDB entry 1p7q

View 1p7q on RCSB PDB site
Description: Crystal Structure of HLA-A2 Bound to LIR-1, a Host and Viral MHC Receptor
Class: Immune system
Keywords: HLA-A2/Lir-1 Complex, Immune system
Deposited on 2003-05-05, released 2003-10-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3.4 Å
R-factor: 0.218
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HLA class I histocompatibility antigen, A-2 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-A OR HLAA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1p7qa1, d1p7qa2
  • Chain 'B':
    Compound: Beta-2-microglobulin
    Species: Homo sapiens [TaxId:9606]
    Gene: B2M
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1p7qb_
  • Chain 'C':
    Compound: Pol polyprotein
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: leukocyte immunoglobulin-like receptor 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1p7qd1, d1p7qd2

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1p7qA (A:)
gshsmryfftsvsrpgrgeprfiavgyvddtqfvrfdsdaasqrmeprapwieqegpeyw
dgetrkvkahsqthrvdlgtlrgyynqseagshtvqrmygcdvgsdwrflrgyhqyaydg
kdyialkedlrswtaadmaaqttkhkweaahvaeqlraylegtcvewlrrylengketlq
rtdapkthmthhavsdheatlrcwalsfypaeitltwqrdgedqtqdtelvetrpagdgt
fqkwaavvvpsgqeqrytchvqheglpkpltlrwep

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1p7qB (B:)
iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm

    Sequence, based on observed residues (ATOM records): (download) 
    >1p7qB (B:)
iqrtpkiqvysrhpaenflncyvsgfhpsdievdllkngeriekvehsdlsfskdwsfyl
lyyteftptdeyacrvnhvtlsqpkivkwdrdm

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1p7qD (D:)
hlpkptlwaepgsvitqgspvtlrcqggqetqeyrlyrekktapwitripqelvkkgqfp
ipsitwehagryrcyygsdtagrsessdplelvvtgayikptlsaqpspvvnsggnvtlq
cdsqvafdgfilckegedehpqclnsqphargssraifsvgpvspsrrwwyrcyaydsns
pyewslpsdllellvlg

    Sequence, based on observed residues (ATOM records): (download) 
    >1p7qD (D:)
pkptlwaepgsvitqgspvtlrcqtqeyrlyrekktapwitripqelvkkgqfpipsitw
ehagryrcyyrsessdplelvvtgayikptlsaqpspvvnsggnvtlqcdsqvafdgfil
ckegehpqclnsqphargssraifsvgpvspsrrwwyrcyaydsnspyewslpsdllell
vlg