PDB entry 1p72

View 1p72 on RCSB PDB site
Description: Crystal structure of EHV4-TK complexed with Thy and ADP
Class: transferase
Keywords: P-loop, Lid, TRANSFERASE
Deposited on 2003-04-30, released 2003-11-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.189
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thymidine kinase
    Species: Equid herpesvirus 4 [TaxId:10331]
    Gene: TK
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24425 (4-333)
      • cloning artifact (1-3)
    Domains in SCOPe 2.06: d1p72a1, d1p72a2
  • Chain 'B':
    Compound: Thymidine kinase
    Species: Equid herpesvirus 4 [TaxId:10331]
    Gene: TK
    Database cross-references and differences (RAF-indexed):
    • Uniprot P24425 (4-333)
      • cloning artifact (1-3)
    Domains in SCOPe 2.06: d1p72b1, d1p72b2
  • Heterogens: SO4, ADP, THM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1p72A (A:)
gshmvtivriyldgvygigksttgrvmasaasggsptlyfpepmaywrtlfetdvisgiy
dtqnrkqqgnlavddaalitahyqsrfttpylilhdhtctlfggnslqrgtqpdltlvfd
rhpvastvcfpaaryllgdmsmcalmamvatlprepqggnivvttlnveehirrlrtrar
igeqiditliatlrnvyfmlvntchflrsgrvwrdgwgelptscgaykhratqmdafqer
vspelgdtlfalfktqellddrgvilevhawaldalmlklrnlnvfsadlsgtprqcaav
vesllplmsstlsdfdsasaleraartfnaemgv

    Sequence, based on observed residues (ATOM records): (download) 
    >1p72A (A:)
shmvtivriyldgvygigksttgrvmasaasggsptlyfpepmaywrtlfetdvisgiyd
tqndaalitahyqsrfttpylilhdhtctlfggnslqrgtqpdltlvfdrhpvastvcfp
aaryllgdmsmcalmamvatlprepqggnivvttlnveehirrlrtrarigeqiditlia
tlrnvyfmlvntchflrsgrvwrdgwgelptscgaykhratqmdafqervspelgdtlfa
lfktqellddrgvilevhawaldalmlklrnlnvfsadlsgtprqcaavvesllplmsst
lsdfdsasaleraartfnaemgv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1p72B (B:)
gshmvtivriyldgvygigksttgrvmasaasggsptlyfpepmaywrtlfetdvisgiy
dtqnrkqqgnlavddaalitahyqsrfttpylilhdhtctlfggnslqrgtqpdltlvfd
rhpvastvcfpaaryllgdmsmcalmamvatlprepqggnivvttlnveehirrlrtrar
igeqiditliatlrnvyfmlvntchflrsgrvwrdgwgelptscgaykhratqmdafqer
vspelgdtlfalfktqellddrgvilevhawaldalmlklrnlnvfsadlsgtprqcaav
vesllplmsstlsdfdsasaleraartfnaemgv

    Sequence, based on observed residues (ATOM records): (download) 
    >1p72B (B:)
shmvtivriyldgvygigksttgrvmasaasptlyfpepmaywrtlfetdvisgiydtqn
rkqqgnlavddaalitahyqsrfttpylilhdhtctlfggnslqrgtqpdltlvfdrhpv
astvcfpaaryllgdmsmcalmamvatlprepqggnivvttlnveehirrlrtrarigeq
iditliatlrnvyfmlvntchflrsgrvwrdgwgelptscgaykhratqmdafqervspe
lgdtlfalfktqellddrgvilevhawaldalmlklrnlnvfsadlsgtprqcaavvesl
lplmsstlsdfdsasaleraartfnaemgv