PDB entry 1p69

View 1p69 on RCSB PDB site
Description: structural basis for variation in adenovirus affinity for the cellular receptor car (p417s mutant)
Class: Viral protein/receptor
Keywords: VIRUS, VIRAL PROTEIN, Viral protein/receptor COMPLEX
Deposited on 2003-04-29, released 2004-05-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.215
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fiber protein
    Species: Human adenovirus 12 [TaxId:28282]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P36711 (0-184)
      • engineered (14)
    Domains in SCOPe 2.07: d1p69a_
  • Chain 'B':
    Compound: coxsackievirus and adenovirus receptor
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P78310 (1-123)
      • cloning artifact (0)
    Domains in SCOPe 2.07: d1p69b1, d1p69b2

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1p69A (A:)
    tpydpltlwttpdpspncsliqeldakltlcltkngsivngivslvgvkgnllniqsttt
    tvgvhlvfdeqgrlitstptalvpqaswgyrqgqsvstntvtnglgfmpnvsayprpnas
    eaksqmvsltylqgdtskpitmkvafngitslngysltfmwsglsnyinqpfstpscsfs
    yitqe
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1p69B (B:)
    gittpeemiekakgetaylpckftlspedqgpldiewlispadnqkvdqviilysgdkiy
    ddyypdlkgrvhftsndlksgdasinvtnlqlsdigtyqckvkkapgvankkihlvvlvk
    psga