PDB entry 1p5w

View 1p5w on RCSB PDB site
Description: The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants
Class: Virus/DNA
Keywords: parvovirade, canine parvovirus, Icosahedral virus, Virus/DNA COMPLEX
Deposited on 2003-04-28, released 2003-08-26
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 3.3 Å
R-factor: 0.2
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: coat protein vp2
    Species: Feline panleukopenia virus [TaxId:10788]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P17455 (0-547)
      • engineered (56)
    Domains in SCOPe 2.06: d1p5wa_
  • Chain 'B':
    Compound: 5'-d(p*(3dr)p*tp*ap*cp*cp*tp*cp*tp*tp*gp*c)-3'
  • Heterogens: MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1p5wA (A:)
gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavrgnm
alddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvses
atqpptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdr
tlipshtgtsgtptniyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlt
htwqtnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaev
gysapyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetpe
rftyiahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygplta
lnnvppvypngqiwdkefdtdlkprlhvnapfvcqnncpgqlfvkvapnltneydpdasa
nmsrivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeks
qlaprkly

    Sequence, based on observed residues (ATOM records): (download) 
    >1p5wA (A:)
gvgistgtfnnqtefkflengwveitanssrlvhlnmpesenyrrvvvnnmdktavrgnm
alddihaqivtpwslvdanawgvwfnpgdwqlivntmselhlvsfeqeifnvvlktvsep
ptkvynndltaslmvaldsnntmpftpaamrsetlgfypwkptiptpwryyfqwdrtlip
shtgtsgtptniyhgtdpddvqfytiensvpvhllrtgdefatgtfffdckpcrlthtwq
tnralglppflnslpqsegatnfgdigvqqdkrrgvtqmgntnyiteatimrpaevgysa
pyysfeastqgpfktpiaagrggaqtdenqaadgnpryafgrqhgqkttttgetperfty
iahqdtgrypegdwiqninfnlpvtndnvllptdpiggktginytnifntygpltalnnv
ppvypngqiwdkefdtdlkprlhvnapfvcqnncpgqlfvkvapnltneydpdasanmsr
ivtysdfwwkgklvfkaklrashtwnpiqqmsinvdnqfnyvpsniggmkivyeksqlap
rkly

  • Chain 'B':
    No sequence available.