PDB entry 1p2c
View 1p2c on RCSB PDB site
Description: crystal structure analysis of an anti-lysozyme antibody
Class: immune system/hydrolase
Keywords: monoclonal antibody IgG1, kappa antibody/antigen complex, IMMUNE SYSTEM/HYDROLASE COMPLEX
Deposited on
2003-04-15, released
2004-02-17
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.204
AEROSPACI score: 0.44
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: light chain anti-lysozyme antibody F10.6.6
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1p2ca1, d1p2ca2 - Chain 'B':
Compound: heavy chain VH+CH1 anti-lysozyme antibody F10.6.6
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1p2cb1, d1p2cb2 - Chain 'C':
Compound: Lysozyme C
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1p2cc_ - Chain 'D':
Compound: light chain anti-lysozyme antibody F10.6.6
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1p2cd1, d1p2cd2 - Chain 'E':
Compound: heavy chain VH+CH1 anti-lysozyme antibody F10.6.6
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1p2ce1, d1p2ce2 - Chain 'F':
Compound: Lysozyme C
Species: Gallus gallus [TaxId:9031]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d1p2cf_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1p2cA (A:)
dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1p2cB (B:)
evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
sssvtvpsspwpsetvtcnvahpasstkvdkkivprdc
Sequence, based on observed residues (ATOM records): (download)
>1p2cB (B:)
evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtv
psspwpsetvtcnvahpasstkvdkkivpr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1p2cC (C:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1p2cD (D:)
dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn
Sequence, based on observed residues (ATOM records): (download)
>1p2cD (D:)
dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnr
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1p2cE (E:)
evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
sssvtvpsspwpsetvtcnvahpasstkvdkkivprdc
Sequence, based on observed residues (ATOM records): (download)
>1p2cE (E:)
evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
ppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtv
psspwpsetvtcnvahpasstkvdkkivprd
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>1p2cF (F:)
kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
qawirgcrl