PDB entry 1p2c

View 1p2c on RCSB PDB site
Description: crystal structure analysis of an anti-lysozyme antibody
Class: immune system/hydrolase
Keywords: monoclonal antibody IgG1, kappa antibody/antigen complex, IMMUNE SYSTEM/HYDROLASE COMPLEX
Deposited on 2003-04-15, released 2004-02-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.204
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: light chain anti-lysozyme antibody F10.6.6
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1P2C
    Domains in SCOPe 2.07: d1p2ca1, d1p2ca2
  • Chain 'B':
    Compound: heavy chain VH+CH1 anti-lysozyme antibody F10.6.6
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1P2C
    Domains in SCOPe 2.07: d1p2cb1, d1p2cb2
  • Chain 'C':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1p2cc_
  • Chain 'D':
    Compound: light chain anti-lysozyme antibody F10.6.6
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1P2C (0-End)
    Domains in SCOPe 2.07: d1p2cd1, d1p2cd2
  • Chain 'E':
    Compound: heavy chain VH+CH1 anti-lysozyme antibody F10.6.6
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 1P2C (0-End)
    Domains in SCOPe 2.07: d1p2ce1, d1p2ce2
  • Chain 'F':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d1p2cf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1p2cA (A:)
    dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
    rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
    sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrn
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1p2cB (B:)
    evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
    nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
    ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
    sssvtvpsspwpsetvtcnvahpasstkvdkkivprdc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1p2cB (B:)
    evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
    nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
    ppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtv
    psspwpsetvtcnvahpasstkvdkkivpr
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1p2cC (C:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >1p2cD (D:)
    dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
    rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
    sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrn
    

    Sequence, based on observed residues (ATOM records): (download)
    >1p2cD (D:)
    dieltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikytsqsmsgips
    rfsgsgsgtdftlsinsvetedfgvyfcqqsgswprtfgggtkldikradaaptvsifpp
    sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnr
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >1p2cE (E:)
    evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
    nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
    ppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytl
    sssvtvpsspwpsetvtcnvahpasstkvdkkivprdc
    

    Sequence, based on observed residues (ATOM records): (download)
    >1p2cE (E:)
    evqlqesgaelmkpgasvkisckatgytfttywiewikqrpghslewigeilpgsdstyy
    nekvkgkvtftadassntaymqlssltsedsavyycargdgfyvywgqgttltvssastt
    ppsvyplapgsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssvtv
    psspwpsetvtcnvahpasstkvdkkivprd
    

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1p2cF (F:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl