PDB entry 1p1z
View 1p1z on RCSB PDB site
Description: X-RAY CRYSTAL STRUCTURE OF THE LECTIN-LIKE NATURAL KILLER CELL RECEPTOR LY-49C BOUND TO ITS MHC CLASS I LIGAND H-2Kb
Class: immune system
Keywords: NK, Kb, MHC, Antigenic Peptide, Ly49, OVA, IMMUNE SYSTEM
Deposited on
2003-04-14, released
2003-11-11
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3.26 Å
R-factor: 0.263
AEROSPACI score: 0.07
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: h-2 class I histocompatibility antigen, k-b alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-K
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1p1za1, d1p1za2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: Mus musculus [TaxId:10090]
Gene: B2M
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1p1zb_ - Chain 'D':
Compound: LY49-C antigen
Species: Mus musculus [TaxId:10090]
Gene: KLRA3 OR LY49C OR LY-49C
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1p1zd_ - Chain 'P':
Compound: Ovalbumin peptide
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1p1zA (A:)
gphslryfvtavsrpglgeprymevgyvddtefvrfdsdaenpryeprarwmeqegpeyw
eretqkakgneqsfrvdlrtllgyynqskggshtiqvisgcevgsdgrllrgyqqyaydg
cdyialnedlktwtaadmaalitkhkweqageaerlraylegtcvewlrrylkngnatll
rtdspkahvthhsrpedkvtlrcwalgfypaditltwqlngeeliqdmelvetrpagdgt
fqkwasvvvplgkeqyytchvyhqglpepltlrw
Sequence, based on observed residues (ATOM records): (download)
>1p1zA (A:)
hslryfvtavsrpglgeprymevgyvddtefvyeprarwmeqegpeyweretqkakgneq
sfrvdlrtllgyynqskggshtiqvisgcevrgyqqyaydgcdyialnedlktwtaadma
alitkhkweqageaerlraylegtcvewlrrylkngnatllrtdspkahvthhsrpedkv
tlrcwalgfypaditltwqlngeeliqdmelvetrpagdgtfqkwasvvvplgkeqyytc
hvyhqglpepltlrw
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1p1zB (B:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
Sequence, based on observed residues (ATOM records): (download)
>1p1zB (B:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemssfskdwsf
yilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1p1zD (D:)
gvvywfcystkcyyfimnkttwsgckancqhysvpilkiededelkflqrhvipenywig
lsydkkkkewawidngpskldmkirkmnfksrgcvflskariedidcnipyycicgkkld
Sequence, based on observed residues (ATOM records): (download)
>1p1zD (D:)
vywfcystkcyyfimnkttwsgckancqhysvpilkiededelkflqrhvipenywigls
ydkkkkewawidngpskldmkirkmnfksrgcvflskariedidcnipyycicgkkld
- Chain 'P':
No sequence available.