PDB entry 1p16
View 1p16 on RCSB PDB site
Description: Structure of an mRNA capping enzyme bound to the phosphorylated carboxyl-terminal domain of RNA polymerase II
Class: transferase
Keywords: guanylyltransferase, candida albicans, RNA polymerase II, transcription, capping, ctd, mRNA
Deposited on
2003-04-11, released
2003-07-15
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.2
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: mRNA capping enzyme alpha subunit
Species: Candida albicans [TaxId:5476]
Gene: CGT1
Database cross-references and differences (RAF-indexed):
- Uniprot P78587 (0-End)
- cloning artifact (0)
- engineered (1)
- cloning artifact (27)
- cloning artifact (57)
- cloning artifact (170)
- cloning artifact (198)
- cloning artifact (211)
- cloning artifact (337)
Domains in SCOPe 2.04: d1p16a1, d1p16a2 - Chain 'B':
Compound: mRNA capping enzyme alpha subunit
Species: Candida albicans [TaxId:5476]
Gene: CGT1
Database cross-references and differences (RAF-indexed):
- Uniprot P78587 (0-End)
- cloning artifact (0)
- engineered (1)
- cloning artifact (27)
- cloning artifact (57)
- cloning artifact (170)
- cloning artifact (198)
- cloning artifact (211)
- cloning artifact (337)
Domains in SCOPe 2.04: d1p16b1, d1p16b2 - Chain 'C':
Compound: phosphorylated peptide from C-terminal of RNA polymerase II
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: phosphorylated peptide from C-terminal of RNA polymerase II
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: PO4, G, GTP, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1p16A (A:)
mvqleereipvipgnkldeeetkelrlmvaellgrrntgfpgsqpvsferrhleetlmqk
dyfvcektdglrcllflindpdkgegvflvtrendyyfipnihfplsvnetrekptyhhg
tlldgelvlenrnvsepvlryvifdalaihgkciidrplpkrlgyitenvmkpfdnfkkh
npdivnspefpfkvgfktmltsyhaddvlskmdklfhasdgliytcaetpyvfgtdqtll
kwkpaeentvdfqlefvfnevqdpdlderdptstyldydakpnliklrvwqgsnvhtdfa
kldlsdddwerlkaleqplqgriaecrqsttkkgywemlrfrndksngnhisvvekilvs
ikdgvkekeviewcpkisrawkkrendrrqkhfng
Sequence, based on observed residues (ATOM records): (download)
>1p16A (A:)
mvqleereipvipgnkldeeetkelrlmvaellgrrntgfpgsqpvsferrhleetlmqk
dyfvcektdglrcllflindpdkgegvflvtrendyyfipnihfplsvnetrekptyhhg
tlldgelvlenrnvsepvlryvifdalaihgkciidrplpkrlgyitenvmkpfdnfkkh
npdivnspefpfkvgfktmltsyhaddvlskmdklfhasdgliytcaetpyvfgtdqtll
kwkpaeentvdfqlefvfnevqdpdlderdptstyldydakpnliklrvwqgsnvhtdfa
kldlsdddwerlkaleqplqgriaecrqsttkkgywemlrfrndksngnhisvvekilvs
ikdgvkekeviewcpkisrawkkrendrrq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1p16B (B:)
mvqleereipvipgnkldeeetkelrlmvaellgrrntgfpgsqpvsferrhleetlmqk
dyfvcektdglrcllflindpdkgegvflvtrendyyfipnihfplsvnetrekptyhhg
tlldgelvlenrnvsepvlryvifdalaihgkciidrplpkrlgyitenvmkpfdnfkkh
npdivnspefpfkvgfktmltsyhaddvlskmdklfhasdgliytcaetpyvfgtdqtll
kwkpaeentvdfqlefvfnevqdpdlderdptstyldydakpnliklrvwqgsnvhtdfa
kldlsdddwerlkaleqplqgriaecrqsttkkgywemlrfrndksngnhisvvekilvs
ikdgvkekeviewcpkisrawkkrendrrqkhfng
Sequence, based on observed residues (ATOM records): (download)
>1p16B (B:)
mvqleereipvipgnkldeeetkelrlmvaellgrrntgfpgsqpvsferrhleetlmqk
dyfvcektdglrcllflindpdkgegvflvtrendyyfipnihfplsvnetrekptyhhg
tlldgelvlenrnvsepvlryvifdalaihgkciidrplpkrlgyitenvmkpfdnfkkh
npdivnspefpfkvgfktmltsyhaddvlskmdklfhasdgliytcaetpyvfgtdqtll
kwkpaeentvdfqlefvfnevqyldydakpnliklrvwqgsnvhtdfakldlsdddwerl
kaleqplqgriaecrqsttkkgywemlrfrndksngnhisvvekilvsikdgvkekevie
wcpkisrawkkrendrr
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.