PDB entry 1oqv

View 1oqv on RCSB PDB site
Description: Structure of TcpA, the Type IV pilin subunit from the toxin co-regulated pilus of Vibrio cholerae classical biotype
Class: cell adhesion
Keywords: TcpA, Type IV pilin, pilin, pilus filament, Vibrio cholerae, fiber forming protein, adhesin, fimbriae, CELL ADHESION
Deposited on 2003-03-11, released 2003-06-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.3 Å
R-factor: 0.117
AEROSPACI score: 0.8 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: toxin-coregulated pilus subunit
    Species: Vibrio cholerae [TaxId:666]
    Gene: tcpa
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1oqva_
  • Chain 'B':
    Compound: toxin-coregulated pilus subunit
    Species: Vibrio cholerae [TaxId:666]
    Gene: tcpa
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1oqvb_
  • Chain 'C':
    Compound: toxin-coregulated pilus subunit
    Species: Vibrio cholerae [TaxId:666]
    Gene: tcpa
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1oqvc_
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1oqvA (A:)
mgsshhhhhhssglvprgshmdsqnmtkaaqslnsiqvaltqtyrglgnypatadataas
kltsglvslgkissdeaknpfigtnmnifsfprnaaankafaisvdgltqaqcktlitsv
gdmfpyiaikaggavaladlgdfensaaaaetgvgviksiapasknldltnithveklck
gtapfgvafgns

    Sequence, based on observed residues (ATOM records): (download) 
    >1oqvA (A:)
dsqnmtkaaqslnsiqvaltqtyrglgnypatadataaskltsglvslgkissdeaknpf
igtnmnifsfprnaaankafaisvdgltqaqcktlitsvgdmfpyiaikaggavaladlg
dfensaaaaetgvgviksiapasknldltnithveklckgtapfgvafgns

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1oqvB (B:)
mgsshhhhhhssglvprgshmdsqnmtkaaqslnsiqvaltqtyrglgnypatadataas
kltsglvslgkissdeaknpfigtnmnifsfprnaaankafaisvdgltqaqcktlitsv
gdmfpyiaikaggavaladlgdfensaaaaetgvgviksiapasknldltnithveklck
gtapfgvafgns

    Sequence, based on observed residues (ATOM records): (download) 
    >1oqvB (B:)
dsqnmtkaaqslnsiqvaltqtyrglgnypatadataaskltsglvslgkissdeaknpf
igtnmnifsfprnaaankafaisvdgltqaqcktlitsvgdmfpyiaikaggavaladlg
dfensaaaaetgvgviksiapasknldltnithveklckgtapfgvafgns

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1oqvC (C:)
mgsshhhhhhssglvprgshmdsqnmtkaaqslnsiqvaltqtyrglgnypatadataas
kltsglvslgkissdeaknpfigtnmnifsfprnaaankafaisvdgltqaqcktlitsv
gdmfpyiaikaggavaladlgdfensaaaaetgvgviksiapasknldltnithveklck
gtapfgvafgns

    Sequence, based on observed residues (ATOM records): (download) 
    >1oqvC (C:)
dsqnmtkaaqslnsiqvaltqtyrglgnypatadataaskltsglvslgkissdeaknpf
igtnmnifsfprnaaankafaisvdgltqaqcktlitsvgdmfpyiaikaggavaladlg
dfensaaaaetgvgviksiapasknldltnithveklckgtapfgvafgns