PDB entry 1onk

View 1onk on RCSB PDB site
Description: Mistletoe lectin I from viscum album
Class: hydrolase/sugar binding protein
Keywords: RIBOSOME-INACTIVATING PROTEIN TYPE II, hydrolase-sugar binding protein COMPLEX
Deposited on 2003-02-28, released 2004-02-28
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.172
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Beta-galactoside specific lectin I A chain
    Species: Viscum album [TaxId:3972]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1onka_
  • Chain 'B':
    Compound: Galactose specific lectin I B chain
    Species: Viscum album [TaxId:3972]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1onkb1, d1onkb2
  • Heterogens: NAG, PO4, AZI, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1onkA (A:)
yerlrlrvthqttgeeyfrfitllrdyvssgsfsneipllrqstipvsdaqrfvlveltn
qgqdsvtaaidvtnayvvayqagdqsyflrdaprgaethlftgttrsslpfngsypdler
yaghrdqiplgidqliqsvtalrfpggstrtqarsililiqmiseaarfnpilwryrqyi
nsgasflpdvymleletswgqqstqvqhstdgvfnnpirlaippgnfvtltnvrdviasl
aimlfvcgerpsss

    Sequence, based on observed residues (ATOM records): (download) 
    >1onkA (A:)
yerlrlrvthqttgeeyfrfitllrdyvssgsfsneipllrqstipvsdaqrfvlveltn
qgqdsvtaaidvtnayvvayqagdqsyflrdaprgaethlftgttrsslpfngsypdler
yaghrdqiplgidqliqsvtalrfpggstrtqarsililiqmiseaarfnpilwryrqyi
nsgasflpdvymleletswgqqstqvqhstdgvfnnpirlaippgnfvtltnvrdviasl
aimlfvcge

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1onkB (B:)
ddvtcsaseptvrivgrngmrvdvrdddfhdgnqiqlwpsksnndpnqlwtikrdgtirs
ngsclttygytagvyvmifdcntavreatiwqiwdngtiinprsnlvlaassgikgttlt
vqtldytlgqgwlagndtaprevtiygfrdlcmesnggsvwvetcdssqknqkwalygdg
sirpkqnqdqcltsgrdsvstvinivscsgasgsqrwvftnegailnlknglamdvaqan
pklrriiiypatgkpnqmwlpvf