PDB entry 1omi

View 1omi on RCSB PDB site
Description: Crystal structure of PrfA,the transcriptional regulator in Listeria monocytogenes
Class: transcription
Keywords: Transcriptional regulator PrfA, CAP fold, LISTERIA MONOCYTOGENES, Structural Genomics, PSI, Protein Structure Initiative, New York SGX Research Center for Structural Genomics, NYSGXRC, TRANSCRIPTION
Deposited on 2003-02-25, released 2003-03-11
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.244
AEROSPACI score: 0.23 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: listeriolysin regulatory protein
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: PRFA OR LMO0200
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22262
      • cloning artifact (15-16)
    Domains in SCOPe 2.03: d1omia1, d1omia2
  • Chain 'B':
    Compound: listeriolysin regulatory protein
    Species: Listeria monocytogenes [TaxId:1639]
    Gene: PRFA OR LMO0200
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22262 (17-247)
      • cloning artifact (15-16)
    Domains in SCOPe 2.03: d1omib1, d1omib2
  • Heterogens: GOL

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1omiA (A:)
gshmasmtggqqmgrgsefkkyletngikpkqfhkkelifnqwdpqeyciflydgitklt
sisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellskn
lthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnl
tmqelgyssgiahssavsriisklkqekvivyknscfyvqnldylkryapkldewfylac
patwgkln

    Sequence, based on observed residues (ATOM records): (download) 
    >1omiA (A:)
gsefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyyk
gafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqv
syslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelsavsriiskl
kqekvivyknscfyvqnldylkryapkldewfylacpatwgkln

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1omiB (B:)
gshmasmtggqqmgrgsefkkyletngikpkqfhkkelifnqwdpqeyciflydgitklt
sisengtimnlqyykgafvimsgfidtetsvgyynleviseqatayvikinelkellskn
lthffyvfqtlqkqvsyslakfndfsingklgsicgqlliltyvygketpdgikitldnl
tmqelgyssgiahssavsriisklkqekvivyknscfyvqnldylkryapkldewfylac
patwgkln

    Sequence, based on observed residues (ATOM records): (download) 
    >1omiB (B:)
gsefkkyletngikpkqfhkkelifnqwdpqeyciflydgitkltsisengtimnlqyyk
gafvimsgfidtetsvgyynleviseqatayvikinelkellsknlthffyvfqtlqkqv
syslakfndfsingklgsicgqlliltyvygketpdgikitldnltmqelgyssavsrii
sklkqekvivyknscfyvqnldylkryapkldewfylacpatwgkln