PDB entry 1okk

View 1okk on RCSB PDB site
Description: homo-heterodimeric complex of the srp gtpases
Class: signal recognition/complex
Keywords: srp, ffh, ftsy, gtpase, membrane targeting, signal sequence recognition
Deposited on 2003-07-26, released 2004-01-19
The last revision prior to the SCOP 1.73 freeze date was dated 2004-03-08, with a file datestamp of 2007-06-28.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.15616
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: signal recognition particle protein
    Species: THERMUS AQUATICUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1okka1, d1okka2
  • Chain 'D':
    Compound: cell division protein ftsy
    Species: THERMUS AQUATICUS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.73: d1okkd1, d1okkd2
  • Heterogens: SO4, MG, GCP, BZP, EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1okkA (A:)
mfqqlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreeal
gkqvlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklal
yykgkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarlea
rdlilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvt
glvltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilgm

    Sequence, based on observed residues (ATOM records): (download) 
    >1okkA (A:)
qlsarlqeaigrlrgrgriteedlkatlreirralmdadvnlevardfvervreealgkq
vlesltpaevilatvyealkealggearlpvlkdrnlwflvglqgsgktttaaklalyyk
gkgrrpllvaadtqrpaareqlrllgekvgvpvlevmdgespesirrrveekarleardl
ilvdtagrlqideplmgelarlkevlgpdevllvldamtgqealsvarafdekvgvtglv
ltkldgdarggaalsarhvtgkpiyfagvsekpeglepfyperlagrilg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1okkD (D:)
gffdrlkaglaktrerllkaipwggnleevleelemallaadvglsateeilqevrasgr
kdlkeavkeklvgmlepderratlrklgfnpqkpkpvepkgrvvlvvgvngvgktttiak
lgryyqnlgkkvmfcagdtfraaggtqlsewgkrlsipviqgpegtdpaalaydavqamk
argydllfvdtagrlhtkhnlmeelkkvkraiakadpeepkevwlvldavtgqngleqak
kfheavgltgvivtkldgtakggvlipivrtlkvpikfvgvgegpddlqpfdpeafveal
led

    Sequence, based on observed residues (ATOM records): (download) 
    >1okkD (D:)
aipwggnleevleelemallaadvglsateeilqevrasgrkdlkeavkeklvgmleppv
epkgrvvlvvgvngvgktttiaklgryyqnlgkkvmfcagdtfraaggtqlsewgkrlsi
pviqgpegtdpaalaydavqamkargydllfvdtagrlhtkhnlmeelkkvkraiakadp
eepkevwlvldavtgqngleqakkfheavgltgvivtkldgtakggvlipivrtlkvpik
fvgvgegpddlqpfdpeafvealle