PDB entry 1okb
View 1okb on RCSB PDB site
Description: crystal structure of uracil-DNA glycosylase from atlantic cod (gadus morhua)
Class: hydrolase
Keywords: hydrolase, uracil-DNA glycosylase, crystal structure, cold-adaptation, base excision repair, structure-function relationship
Deposited on
2003-07-21, released
2004-04-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.1861
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: uracil-DNA glycosylase
Species: Gadus morhua [TaxId:8049]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9I983 (0-222)
- engineered mutation (0-2)
Domains in SCOPe 2.08: d1okba_ - Chain 'B':
Compound: uracil-DNA glycosylase
Species: Gadus morhua [TaxId:8049]
Database cross-references and differences (RAF-indexed):
- Uniprot Q9I983 (0-222)
- engineered mutation (0-2)
Domains in SCOPe 2.08: d1okbb_ - Heterogens: GOL, CL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1okbA (A:)
meffgetwrrelaaefekpyfkqlmsfvadersrhtvyppadqvyswtemcdiqdvkvvi
lgqdpyhgpnqahglcfsvqkpvppppslvniykelctdidgfkhpghgdlsgwakqgvl
llnavltvrahqanshkdrgwetftdavikwlsvnregvvfllwgsyahkkgatidrkrh
hvlqavhpsplsahrgflgckhfskangllklsgtepinwral
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1okbB (B:)
meffgetwrrelaaefekpyfkqlmsfvadersrhtvyppadqvyswtemcdiqdvkvvi
lgqdpyhgpnqahglcfsvqkpvppppslvniykelctdidgfkhpghgdlsgwakqgvl
llnavltvrahqanshkdrgwetftdavikwlsvnregvvfllwgsyahkkgatidrkrh
hvlqavhpsplsahrgflgckhfskangllklsgtepinwral