PDB entry 1ojd

View 1ojd on RCSB PDB site
Description: human monoamine oxidase b in complex with lauryldimethylamine-n-oxide (ldao)
Class: oxidoreductase
Keywords: oxidoreductase, fad-containing amine oxidase, maob
Deposited on 2003-07-08, released 2003-08-15
The last revision prior to the SCOP 1.75 freeze date was dated 2003-08-21, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.252
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojda1, d1ojda2
  • Chain 'B':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdb1, d1ojdb2
  • Chain 'C':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdc1, d1ojdc2
  • Chain 'D':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdd1, d1ojdd2
  • Chain 'E':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojde1, d1ojde2
  • Chain 'F':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdf1, d1ojdf2
  • Chain 'G':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdg1, d1ojdg2
  • Chain 'H':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdh1, d1ojdh2
  • Chain 'I':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdi1, d1ojdi2
  • Chain 'L':
    Compound: amine oxidase [flavin-containing] b
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1ojdl1, d1ojdl2
  • Heterogens: FAD, LDA

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ojdA (A:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdA (A:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ojdB (B:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdB (B:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrlig

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ojdC (C:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdC (C:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltti

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ojdD (D:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdD (D:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrlig

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1ojdE (E:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdE (E:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltti

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1ojdF (F:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdF (F:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltt

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1ojdG (G:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdG (G:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrlig

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1ojdH (H:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdH (H:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltti

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1ojdI (I:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdI (I:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltt

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1ojdL (L:)
msnkcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsy
vgptqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwr
tmddmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethev
salwflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidq
trenvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivy
ykepfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeer
lkklcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdr
iyfagtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpittt
flerhlpsvpgllrliglttifsatalgflahkrgllvrv

    Sequence, based on observed residues (ATOM records): (download) 
    >1ojdL (L:)
kcdvvvvgggisgmaaakllhdsglnvvvleardrvggrtytlrnqkvkyvdlggsyvgp
tqnrilrlakelgletykvneverlihhvkgksypfrgpfppvwnpityldhnnfwrtmd
dmgreipsdapwkaplaeewdnmtmkelldklcwtesakqlatlfvnlcvtaethevsal
wflwyvkqcggttriisttnggqerkfvggsgqvserimdllgdrvklerpviyidqtre
nvlvetlnhemyeakyvisaipptlgmkihfnpplpmmrnqmitrvplgsvikcivyyke
pfwrkkdycgtmiidgeeapvaytlddtkpegnyaaimgfilahkarklarltkeerlkk
lcelyakvlgslealepvhyeeknwceeqysggcyttyfppgiltqygrvlrqpvdriyf
agtetathwsgymegaveageraareilhamgkipedeiwqsepesvdvpaqpitttfle
rhlpsvpgllrligltt