PDB entry 1ohg

View 1ohg on RCSB PDB site
Description: structure of the dsdna bacteriophage hk97 mature empty capsid
Class: virus
Keywords: virus, virus coat protein, virus/viral protein, bacteriophage, capsid, auto- catalytic cross-link, icosahedral virus
Deposited on 2003-05-26, released 2003-12-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-01-11, with a file datestamp of 2012-01-06.
Experiment type: XRAY
Resolution: 3.45 Å
R-factor: 0.373
AEROSPACI score: 0.03 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohga_
  • Chain 'B':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohgb_
  • Chain 'C':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohgc_
  • Chain 'D':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohgd_
  • Chain 'E':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohge_
  • Chain 'F':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohgf_
  • Chain 'G':
    Compound: Major capsid protein
    Species: Bacteriophage HK97 [TaxId:37554]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ohgg_
  • Heterogens: SO4, CL

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ohgA (A:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgA (A:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ohgB (B:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgB (B:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ohgC (C:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgC (C:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ohgD (D:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgD (D:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1ohgE (E:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgE (E:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1ohgF (F:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgF (F:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1ohgG (G:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssgs

    Sequence, based on observed residues (ATOM records): (download) 
    >1ohgG (G:)
slgsdadsagsliqpmqipgiimpglrrltirdllaqgrtssnaleyvreevftnnadvv
aekalkpesditfskqtanvktiahwvqasrqvmddapmlqsyinnrlmyglalkeegql
lngdgtgdnleglnkvataydtslnatgdtradiiahaiyqvtesefsasgivlnprdwh
niallkdnegryifggpqaftsnimwglpvvptkaqaagtftvggfdmasqvwdrmdatv
evsredrdnfvknmltilceerlalahyrptaiikgtfssg