PDB entry 1ogv
View 1ogv on RCSB PDB site
Description: lipidic cubic phase crystal structure of the photosynthetic reaction centre from rhodobacter sphaeroides
Class: reaction centre
Keywords: reaction centre, photosynthesis, charge separation, integral membrane protein, lipid, electron transport, bacteriochlorophyll, transmembrane
Deposited on
2003-05-13, released
2003-08-05
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.35 Å
R-factor: 0.214
AEROSPACI score: 0.33
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'H':
Compound: reaction center protein h chain
Species: Rhodobacter sphaeroides [TaxId:1063]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ogvh1, d1ogvh2 - Chain 'L':
Compound: reaction center protein l chain
Species: Rhodobacter sphaeroides [TaxId:1063]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ogvl_ - Chain 'M':
Compound: reaction center protein m chain
Species: Rhodobacter sphaeroides [TaxId:1063]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d1ogvm_ - Heterogens: BCL, BPH, U10, CDL, FE2, CL, HOH
PDB Chain Sequences:
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1ogvH (H:)
dlaslaiysfwiflagliyylqtenmregyplenedgtpaanqgpfplpkpktfilphgr
gtltvpgpesedrpialartavsegfphaptgdpmkdgvgpaswvarrdlpeldghghnk
ikpmkaaagfhvsagknpiglpvrgcdleiagkvvdiwvdipeqmarflevelkdgstrl
lpmqmvkvqsnrvhvnalssdlfagiptiksptevtlleedkicgyvagglmyaapkrks
vvaamlaeya
Sequence, based on observed residues (ATOM records): (download)
>1ogvH (H:)
dlaslaiysfwiflagliyylqtenmregyplenedgtpaanqgpfplpkpktfilphgr
gtltvpgpesedrpialartavsegfphaptgdpmkdgvgpaswvarrdlpeldghghnk
ikpmkaaagfhvsagknpiglpvrgcdleiagkvvdiwvdipeqmarflevelkdgstrl
lpmqmvkvqsnrvhvnalssdlfagiptiksptevtlleedkicgyvagglmyaapk
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>1ogvL (L:)
allsferkyrvpggtlvggnlfdfwvgpfyvgffgvatfffaalgiiliawsavlqgtwn
pqlisvyppaleyglggaplakgglwqiiticatgafvswalreveicrklgigyhipfa
fafailayltlvlfrpvmmgawgyafpygiwthldwvsntgytygnfhynpahmiaisff
ftnalalalhgalvlsaanpekgkemrtpdhedtffrdlvgysigtlgihrlglllslsa
vffsalcmiitgtiwfdqwvdwwqwwvklpwwanipgging
- Chain 'M':
Sequence, based on SEQRES records: (download)
>1ogvM (M:)
aeyqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlsl
fsglmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasf
fmfvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygif
shldwtnnfslvhgnlfynpfhglsiaflygsallfamhgatilavsrfggereleqiad
rgtaaeraalfwrwtmgfnatmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqn
hgmapln
Sequence, based on observed residues (ATOM records): (download)
>1ogvM (M:)
aeyqnifsqvqvrgpadlgmtedvnlanrsgvgpfstllgwfgnaqlgpiylgslgvlsl
fsglmwfftigiwfwyqagwnpavflrdlfffsleppapeyglsfaaplkegglwliasf
fmfvavwswwgrtylraqalgmgkhtawaflsaiwlwmvlgfirpilmgswseavpygif
shldwtnnfslvhgnlfynpfhglsiaflygsallfamhgatilavsrfggereleqiad
rgtaaeraalfwrwtmgfnatmegihrwaiwmavlvtltggigillsgtvvdnwyvwgqn
hg