PDB entry 1ods

View 1ods on RCSB PDB site
Description: cephalosporin c deacetylase from bacillus subtilis
Class: hydrolase
Keywords: hydrolase, alpha/beta hydrolase, acetylxylan, carbohydrate esterase, cephalosporin, x-ray structure
Deposited on 2003-02-20, released 2003-07-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.15387
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsa_
  • Chain 'B':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsb_
  • Chain 'C':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsc_
  • Chain 'D':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsd_
  • Chain 'E':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odse_
  • Chain 'F':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsf_
  • Chain 'G':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsg_
  • Chain 'H':
    Compound: Cephalosporin C deacetylase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P94388
      • conflict (219)
      • conflict (254)
    Domains in SCOPe 2.08: d1odsh_
  • Heterogens: CL, MG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1odsA (A:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsA (A:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1odsB (B:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsB (B:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1odsC (C:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsC (C:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1odsD (D:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsD (D:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1odsE (E:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsE (E:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1odsF (F:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsF (F:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1odsG (G:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsG (G:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1odsH (H:)
mqlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlt
yksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgq
qssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtgg
sqgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevq
amktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfghey
ipafqteklaffkqhlkg

    Sequence, based on observed residues (ATOM records): (download) 
    >1odsH (H:)
qlfdlpldqlqtykpektapkdfsefwklsleelakvqaepdlqpvdypadgvkvyrlty
ksfgnaritgwyavpdkegphpaivkyhgynasydgeihemvnwalhgyatfgmlvrgqq
ssedtsisphghalgwmtkgildkdtyyyrgvyldavralevissfdevdetrigvtggs
qgggltiaaaalsdipkaavadypylsnferaidvaleepyleinsffrrngspetevqa
mktlsyfdimnlayrvkvpvlmsiglidkvtppstvfaaynhletkkelkvyryfgheyi
pafqteklaffkqhlk