PDB entry 1od0

View 1od0 on RCSB PDB site
Description: family 1 b-glucosidase from thermotoga maritima
Class: hydrolase
Keywords: hydrolase, glucoside hydrolysis, family gh1, enzyme, glycosidase, cellulose degradation
Deposited on 2003-02-12, released 2003-03-06
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.11 Å
R-factor: 0.213
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: beta-glucosidase a
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1od0a_
  • Chain 'B':
    Compound: beta-glucosidase a
    Species: Thermotoga maritima [TaxId:2336]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OD0 (Start-22)
    • Uniprot Q08638 (23-End)
    Domains in SCOPe 2.06: d1od0b1, d1od0b2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1od0A (A:)
mgsshhhhhhssglvprgshmasnvkkfpegflwgvatasyqiegspladgagmsiwhtf
shtpgnvkngdtgdvacdhynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgl
dfynriidtllekgitpfvtiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrv
knwitlnepwvvaivghlygvhapgmrdiyvafravhnllraharavkvfretvkdgkig
ivfnngyfepasekeediravrfmhqfnnyplflnpiyrgdypelvlefareylpenykd
dmseiqekidfvglnyysghlvkfdpdapakvsfverdlpktamgweivpegiywilkkv
keeynppevyitengaafddvvsedgrvhdqnridylkahigqawkaiqegvplkgyfvw
slldnfewaegyskrfgivyvdystqkrivkdsgywysnvvknngled

    Sequence, based on observed residues (ATOM records): (download) 
    >1od0A (A:)
vkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdhynrwk
edieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfvtiyhw
dlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghlygvhap
gmrdiyvafravhnllraharavkvfretvkdgkigivfnngyfepaseravrfmhqfnn
yplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysghlvkfdpakv
sfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddvvsedgrvhdqn
ridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyvdystqkrivkd
sgywysnvvknngle

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1od0B (B:)
mgsshhhhhhssglvprgshmasnvkkfpegflwgvatasyqiegspladgagmsiwhtf
shtpgnvkngdtgdvacdhynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgl
dfynriidtllekgitpfvtiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrv
knwitlnepwvvaivghlygvhapgmrdiyvafravhnllraharavkvfretvkdgkig
ivfnngyfepasekeediravrfmhqfnnyplflnpiyrgdypelvlefareylpenykd
dmseiqekidfvglnyysghlvkfdpdapakvsfverdlpktamgweivpegiywilkkv
keeynppevyitengaafddvvsedgrvhdqnridylkahigqawkaiqegvplkgyfvw
slldnfewaegyskrfgivyvdystqkrivkdsgywysnvvknngled

    Sequence, based on observed residues (ATOM records): (download) 
    >1od0B (B:)
hmasnvkkfpegflwgvatasyqiegspladgagmsiwhtfshtpgnvkngdtgdvacdh
ynrwkedieiieklgvkayrfsiswprilpegtgrvnqkgldfynriidtllekgitpfv
tiyhwdlpfalqlkggwanreiadwfaeysrvlfenfgdrvknwitlnepwvvaivghly
gvhapgmrdiyvafravhnllraharavkvfretvdgkigivfnngyfepasekeedira
vrfmhqfnnyplflnpiyrgdypelvlefareylpenykddmseiqekidfvglnyysgh
lvkfdpdaakvsfverdlpktamgweivpegiywilkkvkeeynppevyitengaafddv
vsedgrvhdqnridylkahigqawkaiqegvplkgyfvwslldnfewaegyskrfgivyv
dystqkrivkdsgywysnvvknngle