PDB entry 1oc2

View 1oc2 on RCSB PDB site
Description: the structure of nadh in the dtdp-d-glucose dehydratase (rmlb) enzyme
Class: lyase
Keywords: lyase, dehydratase, nadh, rhamnose
Deposited on 2003-02-04, released 2003-10-02
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.173
AEROSPACI score: 0.65 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dtdp-glucose 4,6-dehydratase
    Species: Streptococcus suis [TaxId:1307]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8GIP9 (Start-347)
      • conflict (312)
    Domains in SCOPe 2.03: d1oc2a_
  • Chain 'B':
    Compound: dtdp-glucose 4,6-dehydratase
    Species: Streptococcus suis [TaxId:1307]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8GIP9 (Start-347)
      • conflict (312)
    Domains in SCOPe 2.03: d1oc2b_
  • Heterogens: TDX, NAD, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1oc2A (A:)
msqfkniivtggagfigsnfvhyvynnhpdvhvtvldkltyagnkanleailgdrvelvv
gdiadaelvdklaakadaivhyaaeshndnslndpspfihtnfigtytlleaarkydirf
hhvstdevygdlplredlpghgegpgekftaetnynpsspysstkaasdlivkawvrsfg
vkatisncsnnygpyqhiekfiprqitnilagikpklygegknvrdwihtndhstgvwai
ltkgrmgetyligadgeknnkevlelilekmgqpkdaydhvtdraghdlryaidasklrd
elgwtpqftdfsegleetiqwytdnqdwwkaekeaveanyaktqevik

    Sequence, based on observed residues (ATOM records): (download) 
    >1oc2A (A:)
qfkniivtggagfigsnfvhyvynnhpdvhvtvldkltyagnkanleailgdrvelvvgd
iadaelvdklaakadaivhyaaeshndnslndpspfihtnfigtytlleaarkydirfhh
vstdevygdlplredlpghgegpgekftaetnynpsspysstkaasdlivkawvrsfgvk
atisncsnnygpyqhiekfiprqitnilagikpklygegknvrdwihtndhstgvwailt
kgrmgetyligadgeknnkevlelilekmgqpkdaydhvtdraghdlryaidasklrdel
gwtpqftdfsegleetiqwytdnqdwwkaekeaveanyaktqevik

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1oc2B (B:)
msqfkniivtggagfigsnfvhyvynnhpdvhvtvldkltyagnkanleailgdrvelvv
gdiadaelvdklaakadaivhyaaeshndnslndpspfihtnfigtytlleaarkydirf
hhvstdevygdlplredlpghgegpgekftaetnynpsspysstkaasdlivkawvrsfg
vkatisncsnnygpyqhiekfiprqitnilagikpklygegknvrdwihtndhstgvwai
ltkgrmgetyligadgeknnkevlelilekmgqpkdaydhvtdraghdlryaidasklrd
elgwtpqftdfsegleetiqwytdnqdwwkaekeaveanyaktqevik

    Sequence, based on observed residues (ATOM records): (download) 
    >1oc2B (B:)
sqfkniivtggagfigsnfvhyvynnhpdvhvtvldkltyagnkanleailgdrvelvvg
diadaelvdklaakadaivhyaaeshndnslndpspfihtnfigtytlleaarkydirfh
hvstdevygdlplredlpghgegpgekftaetnynpsspysstkaasdlivkawvrsfgv
katisncsnnygpyqhiekfiprqitnilagikpklygegknvrdwihtndhstgvwail
tkgrmgetyligadgeknnkevlelilekmgqpkdaydhvtdraghdlryaidasklrde
lgwtpqftdfsegleetiqwytdnqdwwkaekeaveanyaktqevik