PDB entry 1obz

View 1obz on RCSB PDB site
Description: crystal structure of the complex of the pdz tandem of syntenin with an interleukin 5 receptor alpha peptide.
Class: cell adhesion
Keywords: cell adhesion, adhesion/complex, pdz domain, signal transduction, nuclear protein
Deposited on 2003-01-31, released 2003-07-11
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.69 Å
R-factor: 0.148
AEROSPACI score: 0.6 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Syntenin 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OBZ (Start-4)
    • Uniprot O00560 (5-165)
    Domains in SCOPe 2.05: d1obza1, d1obza2
  • Chain 'B':
    Compound: Syntenin 1
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 1OBZ (0-4)
    • Uniprot O00560 (5-End)
    Domains in SCOPe 2.05: d1obzb1, d1obzb2
  • Chain 'P':
    Compound: interleukin 5 receptor alpha
    Species: HOMO SAPIENS, synthetic [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
  • Heterogens: ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1obzA (A:)
gamdprevilckdqdgkiglrlksidngifvqlvqanspaslvglrfgdqvlqingenca
gwssdkahkvlkqafgekitmtirdrpfertitmhkdstghvgfifkngkitsivkdssa
arnglltehniceingqnviglkdsqiadilstsgtvvtitimpaf

    Sequence, based on observed residues (ATOM records): (download) 
    >1obzA (A:)
dprevilckdqdgkiglrlksidngifvqlvqanspaslvglrfgdqvlqingencagws
sdkahkvlkqafgekitmtirdrpfertitmhkdstghvgfifkngkitsivkdssaarn
glltehniceingqnviglkdsqiadilstsgtvvtitimpaf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1obzB (B:)
gamdprevilckdqdgkiglrlksidngifvqlvqanspaslvglrfgdqvlqingenca
gwssdkahkvlkqafgekitmtirdrpfertitmhkdstghvgfifkngkitsivkdssa
arnglltehniceingqnviglkdsqiadilstsgtvvtitimpaf

    Sequence, based on observed residues (ATOM records): (download) 
    >1obzB (B:)
gamdprevilckdqdgkiglrlksidngifvqlvqanspaslvglrfgdqvlqingenca
gwssdkahkvlkqafgekitmtirdrpfertitmhkdstghvgfifkngkitsivkdssa
arnglltehniceingqnviglkdsqiadilstsgtvvtitimpa

  • Chain 'P':
    No sequence available.