PDB entry 1o4y
View 1o4y on RCSB PDB site
Description: the three-dimensional structure of beta-agarase a from zobellia galactanivorans
Class: hydrolase
Keywords: beta-agarase, glycoside hydrolase family 16, agarose degradation, cleavage of beta-1, 4-d-galactose linkages
Deposited on
2003-07-29, released
2003-12-09
The last revision prior to the SCOP 1.73 freeze date was dated
2003-12-09, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 1.48 Å
R-factor: 0.149
AEROSPACI score: 0.67
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: beta-agarase A
Species: Zobellia galactanivorans
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.73: d1o4ya_ - Heterogens: NA, CA, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1o4yA (A:)
mdiaqdwngipvpanpgngmtwqlqdnvsdsfnytssegnrptaftskwkpsyingwtgp
gstifnapqawtngsqlaiqaqpagngksyngiitsknkiqypvymeikakimdqvlana
fwtltddetqeidimegygsdrggtwfaqrmhlshhtfirnpftdyqpmgdatwyynggt
pwrsayhrygcywkdpftleyyidgvkvrtvtraeidpnnhlggtglnqatniiidcenq
tdwrpaatqeeladdsknifwvdwirvykpvavsgggnnslehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1o4yA (A:)
aqdwngipvpanpgngmtwqlqdnvsdsfnytssegnrptaftskwkpsyingwtgpgst
ifnapqawtngsqlaiqaqpagngksyngiitsknkiqypvymeikakimdqvlanafwt
ltddetqeidimegygsdrggtwfaqrmhlshhtfirnpftdyqpmgdatwyynggtpwr
sayhrygcywkdpftleyyidgvkvrtvtraeidpnnhlggtglnqatniiidcenqtdw
rpaatqeeladdsknifwvdwirvykpvav