PDB entry 1o1z

View 1o1z on RCSB PDB site
Description: Crystal structure of glycerophosphodiester phosphodiesterase (GDPD) (TM1621) from Thermotoga maritima at 1.60 A resolution
Class: hydrolase
Keywords: TM1621, GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (GDPD), STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics
Deposited on 2003-02-12, released 2003-04-01
The last revision prior to the SCOP 1.73 freeze date was dated 2005-01-18, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.141
AEROSPACI score: 0.64 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: glycerophosphodiester phosphodiesterase
    Species: Thermotoga maritima
    Gene: TM1621
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X1V6 (13-233)
      • leader sequence (8-12)
    Domains in SCOP 1.73: d1o1za_
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1o1zA (A:)
mgsdkihhhhhhvivlghrgysakylentleafmkaieagangveldvrlskdgkvvvsh
dedlkrlfgldvkirdatvselkeltdgkittlkevfenvsddkiinieikereaadavl
eiskkrknlifssfdldlldekfkgtkygylideenygsienfvervekerpyslhvpyq
afeleyavevlrsfrkkgivifvwtlndpeiyrkirreidgvitdevelfvklr

    Sequence, based on observed residues (ATOM records): (download) 
    >1o1zA (A:)
hhhhvivlghrgysakylentleafmkaieagangveldvrlskdgkvvvshdedlkrlf
gldvkirdatvselkeltdgkittlkevfenvsddkiinieikereaadavleiskkrkn
lifssfdldlldekfkgtkygylideenygsienfvervekerpyslhvpyqafeleyav
evlrsfrkkgivifvwtlndpeiyrkirreidgvitdevelfvklr