PDB entry 1o0y

View 1o0y on RCSB PDB site
Description: Crystal structure of Deoxyribose-phosphate aldolase (TM1559) from Thermotoga maritima at 1.9 A resolution
Class: lyase
Keywords: TM1559, Deoxyribose-phosphate aldolase, STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics
Deposited on 2002-09-13, released 2002-12-25
The last revision prior to the SCOP 1.73 freeze date was dated 2006-03-28, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.179
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: deoxyribose-phosphate aldolase
    Species: Thermotoga maritima
    Gene: TM1559
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X1P5 (12-End)
      • his tag (8-11)
    Domains in SCOP 1.73: d1o0ya_
  • Chain 'B':
    Compound: deoxyribose-phosphate aldolase
    Species: Thermotoga maritima
    Gene: TM1559
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X1P5 (12-End)
      • his tag (8-11)
    Domains in SCOP 1.73: d1o0yb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1o0yA (A:)
mgsdkihhhhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpdd
ikklclearenrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifa
vesgadeidmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacv
isklagahfvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygad
rigtssgvkivqggeerygg

    Sequence, based on observed residues (ATOM records): (download) 
    >1o0yA (A:)
hhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpddikklclea
renrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifavesgadei
dmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacvisklagah
fvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygadrigtssgv
kivqggeeryg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1o0yB (B:)
mgsdkihhhhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpdd
ikklclearenrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifa
vesgadeidmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacv
isklagahfvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygad
rigtssgvkivqggeerygg

    Sequence, based on observed residues (ATOM records): (download) 
    >1o0yB (B:)
hhhhmieyrieeavakyrefyefkpvresagiedvksaiehtnlkpfatpddikklclea
renrfhgvcvnpcyvklareelegtdvkvvtvvgfplganetrtkaheaifavesgadei
dmvinvgmlkakeweyvyedirsvvesvkgkvvkviietcyldteekiaacvisklagah
fvktstgfgtggataedvhlmkwivgdemgvkasggirtfedavkmimygadrigtssgv
kivqggeeryg