PDB entry 1nvf

View 1nvf on RCSB PDB site
Description: Crystal structure of 3-dehydroquinate synthase (DHQS) in complex with ZN2+, ADP and carbaphosphonate
Class: lyase
Keywords: shikimate pathway, aromatic amino acid biosynthesis, dhqs, closed form, form h, domain movement, cyclase, lyase
Deposited on 2003-02-03, released 2003-03-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.184
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3-dehydroquinate synthase
    Species: Emericella nidulans [TaxId:162425]
    Gene: AROMA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nvfa_
  • Chain 'B':
    Compound: 3-dehydroquinate synthase
    Species: Emericella nidulans [TaxId:162425]
    Gene: AROMA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nvfb_
  • Chain 'C':
    Compound: 3-dehydroquinate synthase
    Species: Emericella nidulans [TaxId:162425]
    Gene: AROMA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nvfc_
  • Heterogens: ZN, CL, ADP, CRB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1nvfA (A:)
msnptkisilgresiiadfglwrnyvakdlisdcssttyvlvtdtnigsiytpsfeeafr
kraaeitpsprlliynrppgevsksrqtkadiedwmlsqnppcgrdtvvialgggvigdl
tgfvastymrgvryvqvpttllamvdssiggktaidtplgknligaiwqptkiyidlefl
etlpvrefingmaeviktaaisseeeftaleenaetilkavrrevtpgehrfegteeilk
arilasarhkayvvsaderegglrnllnwghsighaieailtpqilhgecvaigmvkeae
larhlgilkgvavsrivkclaayglptslkdarirkltagkhcsvdqlmfnmaldkkndg
pkkkivllsaigtpyetrasvvanedirvvlap

    Sequence, based on observed residues (ATOM records): (download) 
    >1nvfA (A:)
ptkisilgresiiadfglwrnyvakdlisdcssttyvlvtdtnigsiytpsfeeafrkra
aeitpsprlliynrppgevsksrqtkadiedwmlsqnppcgrdtvvialgggvigdltgf
vastymrgvryvqvpttllamvdssiggktaidtplgknligaiwqptkiyidlefletl
pvrefingmaeviktaaisseeeftaleenaetilkavrrevtpgehrfegteeilkari
lasarhkayvvsaderegglrnllnwghsighaieailtpqilhgecvaigmvkeaelar
hlgilkgvavsrivkclaayglptslkdarirkltagkhcsvdqlmfnmaldkkndgpkk
kivllsaigtpyetrasvvanedirvvl

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1nvfB (B:)
msnptkisilgresiiadfglwrnyvakdlisdcssttyvlvtdtnigsiytpsfeeafr
kraaeitpsprlliynrppgevsksrqtkadiedwmlsqnppcgrdtvvialgggvigdl
tgfvastymrgvryvqvpttllamvdssiggktaidtplgknligaiwqptkiyidlefl
etlpvrefingmaeviktaaisseeeftaleenaetilkavrrevtpgehrfegteeilk
arilasarhkayvvsaderegglrnllnwghsighaieailtpqilhgecvaigmvkeae
larhlgilkgvavsrivkclaayglptslkdarirkltagkhcsvdqlmfnmaldkkndg
pkkkivllsaigtpyetrasvvanedirvvlap

    Sequence, based on observed residues (ATOM records): (download) 
    >1nvfB (B:)
ptkisilgresiiadfglwrnyvakdlisdcssttyvlvtdtnigsiytpsfeeafrkra
aeitpsprlliynrppgevsksrqtkadiedwmlsqnppcgrdtvvialgggvigdltgf
vastymrgvryvqvpttllamvdssiggktaidtplgknligaiwqptkiyidlefletl
pvrefingmaeviktaaisseeeftaleenaetilkavrrevtpgehrfegteeilkari
lasarhkayvvsaderegglrnllnwghsighaieailtpqilhgecvaigmvkeaelar
hlgilkgvavsrivkclaayglptslkdarirkltagkhcsvdqlmfnmaldkkndgpkk
kivllsaigtpyetrasvvanedirvvl

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1nvfC (C:)
msnptkisilgresiiadfglwrnyvakdlisdcssttyvlvtdtnigsiytpsfeeafr
kraaeitpsprlliynrppgevsksrqtkadiedwmlsqnppcgrdtvvialgggvigdl
tgfvastymrgvryvqvpttllamvdssiggktaidtplgknligaiwqptkiyidlefl
etlpvrefingmaeviktaaisseeeftaleenaetilkavrrevtpgehrfegteeilk
arilasarhkayvvsaderegglrnllnwghsighaieailtpqilhgecvaigmvkeae
larhlgilkgvavsrivkclaayglptslkdarirkltagkhcsvdqlmfnmaldkkndg
pkkkivllsaigtpyetrasvvanedirvvlap

    Sequence, based on observed residues (ATOM records): (download) 
    >1nvfC (C:)
ptkisilgresiiadfglwrnyvakdlisdcssttyvlvtdtnigsiytpsfeeafrkra
aeitpsprlliynrppgevsksrqtkadiedwmlsqnppcgrdtvvialgggvigdltgf
vastymrgvryvqvpttllamvdssiggktaidtplgknligaiwqptkiyidlefletl
pvrefingmaeviktaaisseeeftaleenaetilkavrrevtpgehrfegteeilkari
lasarhkayvvsaderegglrnllnwghsighaieailtpqilhgecvaigmvkeaelar
hlgilkgvavsrivkclaayglptslkdarirkltagkhcsvdqlmfnmaldkkndgpkk
kivllsaigtpyetrasvvanedirvvl