PDB entry 1njk

View 1njk on RCSB PDB site
Description: Crystal Structure of YbaW Probable Thioesterase from Escherichia coli
Class: structural genomics, unknown function
Keywords: Structural Genomics, YbaW, Hypothetical Protein, Thioesterase, PSI, Protein Structure Initiative, Midwest Center for Structural Genomics, MCSG, UNKNOWN FUNCTION
Deposited on 2002-12-31, released 2003-07-01
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.214
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Hypothetical protein ybaW
    Species: Escherichia coli [TaxId:562]
    Gene: YBAW
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77712 (22-153)
      • cloning artifact (21)
      • modified residue (22)
      • modified residue (65)
      • modified residue (151)
    Domains in SCOPe 2.06: d1njka1, d1njka2
  • Chain 'B':
    Compound: Hypothetical protein ybaW
    Species: Escherichia coli [TaxId:562]
    Gene: YBAW
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77712 (22-153)
      • cloning artifact (21)
      • modified residue (22)
      • modified residue (65)
      • modified residue (151)
    Domains in SCOPe 2.06: d1njkb1, d1njkb2
  • Chain 'C':
    Compound: Hypothetical protein ybaW
    Species: Escherichia coli [TaxId:562]
    Gene: YBAW
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77712 (22-153)
      • cloning artifact (21)
      • modified residue (22)
      • modified residue (65)
      • modified residue (151)
    Domains in SCOPe 2.06: d1njkc1, d1njkc2
  • Chain 'D':
    Compound: Hypothetical protein ybaW
    Species: Escherichia coli [TaxId:562]
    Gene: YBAW
    Database cross-references and differences (RAF-indexed):
    • Uniprot P77712 (22-153)
      • cloning artifact (21)
      • modified residue (22)
      • modified residue (65)
      • modified residue (151)
    Domains in SCOPe 2.06: d1njkd1, d1njkd2
  • Heterogens: IOD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1njkA (A:)
mgsshhhhhhssgrenlyfqghmqtqikvrgyhldvyqhvnnarylefleearwdglens
dsfqwmtahniafvvvnininyrrpavlsdlltitsqlqqlngksgilsqvitlepegqv
vadalitfvcidlktqkalalegelrekleqmvkgh

    Sequence, based on observed residues (ATOM records): (download) 
    >1njkA (A:)
hmqtqikvrgyhldvyqhvnnarylefleearwdglensdsfqwmtahniafvvvninin
yrrpavlsdlltitsqlqqlngksgilsqvitlepegqvvadalitfvcidlktqkalal
egelrekleqmvk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1njkB (B:)
mgsshhhhhhssgrenlyfqghmqtqikvrgyhldvyqhvnnarylefleearwdglens
dsfqwmtahniafvvvnininyrrpavlsdlltitsqlqqlngksgilsqvitlepegqv
vadalitfvcidlktqkalalegelrekleqmvkgh

    Sequence, based on observed residues (ATOM records): (download) 
    >1njkB (B:)
hmqtqikvrgyhldvyqhvnnarylefleearwdglensdsfqwmtahniafvvvninin
yrrpavlsdlltitsqlqqlngksgilsqvitlepegqvvadalitfvcidlktqkalal
egelrekleqmvk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1njkC (C:)
mgsshhhhhhssgrenlyfqghmqtqikvrgyhldvyqhvnnarylefleearwdglens
dsfqwmtahniafvvvnininyrrpavlsdlltitsqlqqlngksgilsqvitlepegqv
vadalitfvcidlktqkalalegelrekleqmvkgh

    Sequence, based on observed residues (ATOM records): (download) 
    >1njkC (C:)
hmqtqikvrgyhldvyqhvnnarylefleearwdglensdsfqwmtahniafvvvninin
yrrpavlsdlltitsqlqqlngksgilsqvitlepegqvvadalitfvcidlktqkalal
egelrekleqmvk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1njkD (D:)
mgsshhhhhhssgrenlyfqghmqtqikvrgyhldvyqhvnnarylefleearwdglens
dsfqwmtahniafvvvnininyrrpavlsdlltitsqlqqlngksgilsqvitlepegqv
vadalitfvcidlktqkalalegelrekleqmvkgh

    Sequence, based on observed residues (ATOM records): (download) 
    >1njkD (D:)
hmqtqikvrgyhldvyqhvnnarylefleearwdglensdsfqwmtahniafvvvninin
yrrpavlsdlltitsqlqqlngksgilsqvitlepegqvvadalitfvcidlktqkalal
egelrekleqmvk