PDB entry 1nfi

View 1nfi on RCSB PDB site
Description: I-kappa-b-alpha/nf-kappa-b complex
Class: complex (transcription reg/ank repeat)
Keywords: complex (transcription regulation/ank repeat), ankyrin repeat, complex (transcription reg/ank repeat) complex
Deposited on 1998-08-25, released 1998-11-18
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.223
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nf-kappa-b p65
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nfia1, d1nfia2
  • Chain 'B':
    Compound: nf-kappa-b p50
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nfib_
  • Chain 'C':
    Compound: nf-kappa-b p65
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nfic1, d1nfic2
  • Chain 'D':
    Compound: nf-kappa-b p50
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nfid_
  • Chain 'E':
    Compound: I-kappa-b-alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nfie_
  • Chain 'F':
    Compound: I-kappa-b-alpha
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1nfif_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1nfiA (A:)
yveiieqpkqrgmrfrykcegrsagsipgerstdttkthptikingytgpgtvrislvtk
dpphrphphelvgkdcrdgfyeaelcpdrcihsfqnlgiqcvkkrdleqaisqriqtnnn
pfqvpieeqrgdydlnavrlcfqvtvrdpsgrplrlppvlphpifdnrapntaelkicrv
nrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyad
pslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyetfksimkkspfs
g

    Sequence, based on observed residues (ATOM records): (download) 
    >1nfiA (A:)
yveiieqpkqrgmrfrykcegrsagsipgerstdttkthptikingytgpgtvrislvtk
dpphrphphelvgkdcrdgfyeaelcpdrcihsfqnlgiqcvkkrdleqaisqriqtnnn
pfqvpieeqrgdydlnavrlcfqvtvrdpsgrplrlppvlphpifdnrapntaelkicrv
nrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyad
pslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyetfksimk

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nfiB (B:)
snlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhr
qfaivfktpkykdinitkpasvfvqlrrksdletsepkpflyypeik

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nfiC (C:)
yveiieqpkqrgmrfrykcegrsagsipgerstdttkthptikingytgpgtvrislvtk
dpphrphphelvgkdcrdgfyeaelcpdrcihsfqnlgiqcvkkrdleqaisqriqtnnn
pfqvpieeqrgdydlnavrlcfqvtvrdpsgrplrlppvlphpifdnrapntaelkicrv
nrnsgsclggdeifllcdkvqkedievyftgpgweargsfsqadvhrqvaivfrtppyad
pslqapvrvsmqlrrpsdrelsepmefqylpdtddrhrieekrkrtyetfksimkkspfs
g

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nfiD (D:)
snlkivrmdrtagcvtggeeiyllcdkvqkddiqirfyeeeenggvwegfgdfsptdvhr
qfaivfktpkykdinitkpasvfvqlrrksdletsepkpflyypeik

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nfiE (E:)
ltedgdsflhlaiiheekaltmevirqvkgdlaflnfqnnlqqtplhlavitnqpeiaea
llgagcdpelrdfrgntplhlaceqgclasvgvltqscttphlhsilkatnynghtclhl
asihgylgivellvslgadvnaqepcngrtalhlavdlqnpdlvslllkcgadvnrvtyq
gyspyqltwgrpstriqqqlgqltlenlqmlpe

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1nfiF (F:)
ltedgdsflhlaiiheekaltmevirqvkgdlaflnfqnnlqqtplhlavitnqpeiaea
llgagcdpelrdfrgntplhlaceqgclasvgvltqscttphlhsilkatnynghtclhl
asihgylgivellvslgadvnaqepcngrtalhlavdlqnpdlvslllkcgadvnrvtyq
gyspyqltwgrpstriqqqlgqltlenlqmlpe