PDB entry 1nez
View 1nez on RCSB PDB site
Description: The Crystal Structure of a TL/CD8aa Complex at 2.1A resolution:Implications for Memory T cell Generation, Co-receptor Preference and Affinity
Class: immune system
Keywords: immune system
Deposited on
2002-12-12, released
2003-04-08
The last revision prior to the SCOPe 2.08 freeze date was dated
2020-07-29, with a file datestamp of
2020-07-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: N/A
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: H-2 class I histocompatibility antigen, TLA(C) alpha chain
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1neza1, d1neza2 - Chain 'B':
Compound: Beta-2-microglobulin
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1nezb_ - Chain 'G':
Compound: T-cell surface glycoprotein CD8 alpha chain
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Uniprot P01731 (Start-121)
- cloning artifact (122-124)
Domains in SCOPe 2.08: d1nezg1, d1nezg2 - Chain 'H':
Compound: T-cell surface glycoprotein CD8 alpha chain
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1nezh_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1nezA (A:)
gshslryfytalsrpaisepwyiavgylddtqfarfdsagetgtyklsapwveqegpeyw
areteivtsnaqffrenlqtmldyynlsqngshtiqvmygceveffgslfrayeqhgydg
qdyialnedlktwtaadmaaeitrskweqagytelrrtylegpckdsllrylenrkktqe
ctdppkthvthharpegdvtlrcwalgfypahitltwqlngeeliqdtelvetrpagdgt
fqkwaavvvpsgeeqkytchvyheglpepltlrw
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1nezB (B:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'G':
Sequence, based on SEQRES records: (download)
>1nezG (G:)
kpqapelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymassh
nkitwdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlq
kvssalvp
Sequence, based on observed residues (ATOM records): (download)
>1nezG (G:)
apelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymasshnki
twdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlqkvs
sa
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1nezH (H:)
kpqapelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymassh
nkitwdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlq
kvssalvp
Sequence, based on observed residues (ATOM records): (download)
>1nezH (H:)
kpqapelrifpkkmdaelgqkvdlvcevlgsvsqgcswlfqnsssklpqptfvvymassh
nkitwdeklnssklfsamrdtnnkyvltlnkfskenegyyfcsvisnsvmyfssvvpvlq