PDB entry 1ndj

View 1ndj on RCSB PDB site
Description: Streptavidin Mutant Y43F with Biotin at 1.81A Resolution
Class: biotin-binding protein
Keywords: tetramer, BIOTIN-BINDING PROTEIN
Deposited on 2002-12-09, released 2003-09-02
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.81 Å
R-factor: 0.227
AEROSPACI score: 0.44 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Gene: core streptavidin
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered (30)
    Domains in SCOPe 2.04: d1ndja_
  • Chain 'B':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Gene: core streptavidin
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered (30)
    Domains in SCOPe 2.04: d1ndjb_
  • Chain 'C':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Gene: core streptavidin
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered (30)
    Domains in SCOPe 2.04: d1ndjc_
  • Chain 'D':
    Compound: streptavidin
    Species: Streptomyces avidinii [TaxId:1895]
    Gene: core streptavidin
    Database cross-references and differences (RAF-indexed):
    • Uniprot P22629
      • engineered (30)
    Domains in SCOPe 2.04: d1ndjd_
  • Heterogens: BTN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1ndjA (A:)
aeagitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkpsaas

    Sequence, based on observed residues (ATOM records): (download) 
    >1ndjA (A:)
gitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgtalgw
tvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1ndjB (B:)
aeagitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkpsaas

    Sequence, based on observed residues (ATOM records): (download) 
    >1ndjB (B:)
gitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgtalgw
tvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1ndjC (C:)
aeagitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkpsaas

    Sequence, based on observed residues (ATOM records): (download) 
    >1ndjC (C:)
gitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgtalgw
tvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1ndjD (D:)
aeagitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgta
lgwtvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk
vkpsaas

    Sequence, based on observed residues (ATOM records): (download) 
    >1ndjD (D:)
gitgtwynqlgstfivtagadgaltgtfesavgnaesryvltgrydsapatdgsgtalgw
tvawknnyrnahsattwsgqyvggaearintqwlltsgtteanawkstlvghdtftk