PDB entry 1nd4

View 1nd4 on RCSB PDB site
Description: Crystal structure of aminoglycoside-3'-phosphotransferase-IIa
Class: transferase
Keywords: phosphotransferase, protein kinase, ATPase, kanamycin
Deposited on 2002-12-06, released 2003-09-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.206
AEROSPACI score: 0.41 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Aminoglycoside 3'-phosphotransferase
    Species: Klebsiella pneumoniae [TaxId:573]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1nd4a_
  • Chain 'B':
    Compound: Aminoglycoside 3'-phosphotransferase
    Species: Klebsiella pneumoniae [TaxId:573]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1nd4b_
  • Heterogens: MG, ACT, NA, KAN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1nd4A (A:)
    mieqdglhagspaawverlfgydwaqqtigcsdaavfrlsaqgrpvlfvktdlsgalnel
    qdeaarlswlattgvpcaavldvvteagrdwlllgevpgqdllsshlapaekvsimadam
    rrlhtldpatcpfdhqakhrierartrmeaglvdqddldeehqglapaelfarlkarmpd
    gedlvvthgdaclpnimvengrfsgfidcgrlgvadryqdialatrdiaeelggewadrf
    lvlygiaapdsqriafyrlldeff
    

    Sequence, based on observed residues (ATOM records): (download)
    >1nd4A (A:)
    gspaawverlfgydwaqqtigcsdaavfrlsaqgrpvlfvktdlsgalnelqdeaarlsw
    lattgvpcaavldvvteagrdwlllgevpgqdllsshlapaekvsimadamrrlhtldpa
    tcpfdhqakhrierartrmeaglvdqddldeehqglapaelfarlkarmpdgedlvvthg
    daclpnimvengrfsgfidcgrlgvadryqdialatrdiaeelggewadrflvlygiaap
    dsqriafyrlldeff
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >1nd4B (B:)
    mieqdglhagspaawverlfgydwaqqtigcsdaavfrlsaqgrpvlfvktdlsgalnel
    qdeaarlswlattgvpcaavldvvteagrdwlllgevpgqdllsshlapaekvsimadam
    rrlhtldpatcpfdhqakhrierartrmeaglvdqddldeehqglapaelfarlkarmpd
    gedlvvthgdaclpnimvengrfsgfidcgrlgvadryqdialatrdiaeelggewadrf
    lvlygiaapdsqriafyrlldeff
    

    Sequence, based on observed residues (ATOM records): (download)
    >1nd4B (B:)
    gspaawverlfgydwaqqtigcsdaavfrlsaqgrpvlfvktdlsgalnelqdeaarlsw
    lattgvpcaavldvvteagrdwlllgevpgqdllsshlapaekvsimadamrrlhtldpa
    tcpfdhqakhrierartrmeaglvdqddldeehqglapaelfarlkarmpdgedlvvthg
    daclpnimvengrfsgfidcgrlgvadryqdialatrdiaeelggewadrflvlygiaap
    dsqriafyrlldeff