PDB entry 1nby

View 1nby on RCSB PDB site
Description: Crystal Structure of HyHEL-63 complexed with HEL mutant K96A
Class: immune system/hydrolase
Keywords: antibody, lysozyme, mutant, IMMUNE SYSTEM/HYDROLASE COMPLEX
Deposited on 2002-12-04, released 2003-04-01
The last revision prior to the SCOPe 2.03 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-19.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.216
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: antibody kappa light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P01837 (0-213)
      • cloning artifact (0-1)
      • cloning artifact (3)
    Domains in SCOPe 2.03: d1nbya1, d1nbya2
  • Chain 'B':
    Compound: immunoglobulin gamma 1 chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d1nbyb1, d1nbyb2
  • Chain 'C':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P00698 (0-128)
      • engineered (95)
    Domains in SCOPe 2.03: d1nbyc_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nbyA (A:)
    divltqspatlsvtpgdsvslscrasqsisnnlhwyqqkshesprllikyasqsisgips
    rfsgsgsgtdftlsinsvetedfgmyfcqqsnswpytfgggtkleikradaaptvsifpp
    sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrnec
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nbyB (B:)
    evqlqesgpslvkpsqtlsltcsvtgdsvtsdywswirkfpgnkleymgyisysgstyyh
    pslksrisitrdtsknqyylqlnsvttedtatyycaswggdvwgagttvtvssakttaps
    vyplapvcgdttgssvtlgclvkgyfpepvtltwnsgslssgvhtfpavlqsdlytlsss
    vtvtsstwpsqsitcnvahpasstkvdkki
    

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1nbyC (C:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncaakivsdgngmnawvawrnrckgtdv
    qawirgcrl