SCOP 1.75: Structural Classification of Proteins

PDB entry 1n7d

View 1n7d on RCSB PDB site
Description: Extracellular domain of the LDL receptor
Class: lipid transport
Keywords: LDL-Receptor, familial hypercholesterolemia, LDL, cholesterol metabolism
Deposited on 2002-11-13, released 2003-01-21
The last revision prior to the SCOP 1.75 freeze date was dated 2003-01-21, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 3.7 Å
R-factor: 0.381
AEROSPACI score: -0.18 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: low-density lipoprotein receptor
Species: HOMO SAPIENS
Gene: LDLR
Database cross-references and differences (RAF-indexed):
- Uniprot P01130
  - engineered (493)
  - engineered (635)
Domains in SCOP 1.75: d1n7da1, d1n7da2, d1n7da3, d1n7da4, d1n7da5, d1n7da6, d1n7da7, d1n7da8, d1n7da9, d1n7daa
Heterogens: CA, KEG

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>1n7dA (A:)
avgdrcernefqcqdgkcisykwvcdgsaecqdgsdesqetclsvtcksgdfscggrvnr
cipqfwrcdgqvdcdngsdeqgcppktcsqdefrchdgkcisrqfvcdsdrdcldgsdea
scpvltcgpasfqcnsstcipqlwacdndpdcedgsdewpqrcrglyvfqgdsspcsafe
fhclsgecihsswrcdggpdckdksdeencavatcrpdefqcsdgncihgsrqcdreydc
kdmsdevgcvnvtlcegpnkfkchsgecitldkvcnmardcrdwsdepikecgtnecldn
nggcshvcndlkigyeclcpdgfqlvaqrrcedidecqdpdtcsqlcvnleggykcqcee
gfqldphtkackavgsiaylfftnrhevrkmtldrseytslipnlrnvvaldtevasnri
ywsdlsqrmicstqldrahgvssydtvisrdiqapdglavdwihsniywtdsvlgtvsva
dtkgvkrktlfreqgskpraivvdpvhgfmywtdwgtpakikkgglngvdiyslvteniq
wpngitldllsgrlywvdsklhsissidvnggnrktiledekrlahpfslavfedkvfwt
diineaifsanrltgsdvnllaenllspedmvlfhqltqprgvnwcerttlsnggcqylc
lpapqinphspkftcacpdgmllardmrsclteaeaava

Sequence, based on observed residues (ATOM records): (download)

>1n7dA (A:)
svtcksgdfscggnrcipqfwrcdgqvdcngsdeqgcppktcsqdefrchdgrqfvcdsd
rdcldgsdeascpvltcgpasfqcnsstcipqlwacdndpdcedgsdewpqrcrglyvfq
gdsspcsafefhclsgecihsswrcdggpdckdksdeencavatcrpdefqcsdgncihg
srqcdreydckdmsdevgcvnvtlcegpnkfkchsgecitldkvcnmardcrdwsdepik
ecgtnecldnnggcshvcndlkigyeclcpdgfqlvaqrrcedidecqdpdtcsqlcvnl
eggykcqceegfqldphtkackavgsiaylfftnrherkmtldrseytslipnlrnvval
dtevasnriywsdlsqrmicstqldrahgssydtvisrdipdglavdwihsniywtdsvl
gtvsvadtkgvkrktlfreqgskpraivvdpvhgfmywtdwgtpakikkgglngvdiysl
vteniqwpngitldllsgrlywvdsklhsissidvnggnrktiledekrlahpfslavfe
dkvfwtdiineaifsanrltgsdvnllaenllspedmvlfhqltqprgvnwcerttlsng
gcqylclpapqinphspkftcacpdgmllardmrsclte