PDB entry 1n33

View 1n33 on RCSB PDB site
Description: Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer rna anticodon stem-loop mismatched at the second codon position at the a site with paromomycin
Deposited on 2002-10-25, released 2002-11-29
The last revision prior to the SCOP 1.63 freeze date was dated 2002-11-29, with a file datestamp of 2002-11-29.
Experiment type: XRAY
Resolution: 3.35 Å
R-factor: 0.225
AEROSPACI score: 0.12 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'B':
    Domains in SCOP 1.63: d1n33b_
  • Chain 'C':
    Domains in SCOP 1.63: d1n33c1, d1n33c2
  • Chain 'D':
    Domains in SCOP 1.63: d1n33d_
  • Chain 'E':
    Domains in SCOP 1.63: d1n33e1, d1n33e2
  • Chain 'F':
    Domains in SCOP 1.63: d1n33f_
  • Chain 'G':
    Domains in SCOP 1.63: d1n33g_
  • Chain 'H':
    Domains in SCOP 1.63: d1n33h_
  • Chain 'I':
    Domains in SCOP 1.63: d1n33i_
  • Chain 'J':
    Domains in SCOP 1.63: d1n33j_
  • Chain 'K':
    Domains in SCOP 1.63: d1n33k_
  • Chain 'L':
    Domains in SCOP 1.63: d1n33l_
  • Chain 'M':
    Domains in SCOP 1.63: d1n33m_
  • Chain 'N':
    Domains in SCOP 1.63: d1n33n_
  • Chain 'O':
    Domains in SCOP 1.63: d1n33o_
  • Chain 'P':
    Domains in SCOP 1.63: d1n33p_
  • Chain 'Q':
    Domains in SCOP 1.63: d1n33q_
  • Chain 'R':
    Domains in SCOP 1.63: d1n33r_
  • Chain 'S':
    Domains in SCOP 1.63: d1n33s_
  • Chain 'T':
    Domains in SCOP 1.63: d1n33t_
  • Chain 'V':
    Domains in SCOP 1.63: d1n33v_

PDB Chain Sequences:

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33B (B:)
vkelleagvhfgherkrwnpkfaryiyaerngihiidlqktmeelertfrfiedlamrgg
tilfvgtkkqaqdivrmeaeragmpyvnqrwlggmltnfktisqrvhrleelealfaspe
ieerpkkeqvrlkhelerlqkylsgfrllkrlpdaifvvdptkeaiavrearklfipvia
ladtdsdpdlvdyiipgnddairsiqlilsravdliiqarggvvepspsyalvq

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33C (C:)
gnkihpigfrlgitrdwesrwyagkkqyrhllledqrirgllekelysaglarvdieraa
dnvavtvhvakpgvvigrggerirvlreelakltgknvalnvqevqnpnlsaplvaqrva
eqierrfavrraikqavqrvmesgakgakvivsgriggaeqartewaaqgrvplhtlran
idygfalarttygvlgvkayiflgev

  • Chain 'D':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33D (D:)
gryigpvcrlcrregvklylkgercyspkcamerrpyppgqhgqkrarrpsdyavrlrek
qklrriygiserqfrnlfeeaskkkgvtgsvflgllesrldnvvyrlgfavsrrqarqlv
rhghitvngrrvdlpsyrvrpgdeiavaeksrnlelirqnleamkgrkvgpwlsldvegm
kgkflrlpdredlalpvneqlviefysr

  • Chain 'E':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33E (E:)
dfeekmilirrtarmqaggrrfrfgalvvvgdrqgrvglgfgkapevplavqkagyyarr
nmvevplqngtipheievefgaskivlkpaapgtgviagavprailelagvtdiltkelg
srnpiniayatmealrqlrtkadverlrkg

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33F (F:)
mrryevnivlnpnldqsqlalekeiiqralenygarvekveelglrrlaypiakdpqgyf
lwyqvempedrvndlarelrirdnvrrvmvvksqepflana

  • Chain 'G':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33G (G:)
arrrraevrqlqpdlvygdvlvtafinkimrdgkknlaarifydackiiqektgqeplkv
fkqavenvkprmevrsrrvgganyqvpmevsprrqqslalrwlvqaanqrperraavria
helmdaaegkggavkkkedvermaeanrayahyrw

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33H (H:)
mltdpiadmltrirnatrvykestdvpasrfkeeilrilaregfikgyervdvdgkpylr
vylkygprrqgpdprpeqvihhirriskpgrrvyvgvkeiprvrrglgiailstskgvlt
drearklgvggelicevw

  • Chain 'I':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33I (I:)
eqyygtgrrkeavarvflrpgngkvtvngqdfneyfqglvravaaleplravdalgrfda
yitvrgggksgqidaiklgiaralvqynpdyraklkplgfltrdarvverkkygkhkarr
apqyskr

  • Chain 'J':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33J (J:)
kiriklrgfdhktldasaqkiveaarrsgaqvsgpiplptrvrrftvirgpfkhkdsreh
felrthnrlvdiinpnrktieqlmtldlptgveieikt

  • Chain 'K':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33K (K:)
krqvasgrayihasynntivtitdpdgnpitwssggvigykgsrkgtpyaaqlaaldaak
kamaygmqsvdvivrgtgagreqairalqasglqvksivddtpvphngcrpkkkfrkas

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33L (L:)
ptinqlvrkgrekvrkkskvpalkgapfrrgvctvvrtvtpkkpnsalrkvakvrltsgy
evtayipgeghnlqehsvvlirggrvkdlpgvryhivrgvydaagvkdrkksrskygtkk
pkea

  • Chain 'M':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33M (M:)
ariagveiprnkrvdvaltyiygigkarakealektginpatrvkdlteaevvrlreyve
ntwklegelraevaanikrlmdigcyrglrhrrglpvrgqrtrtnartrkgprktvag

  • Chain 'N':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33N (N:)
arkaliekakrtpkfkvraytrcvrcgrarsvyrffglcriclrelahkgqlpgvrkasw

  • Chain 'O':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33O (O:)
pitkeekqkviqefarfpgdtgstevqvalltlrinrlsehlkvhkkdhhshrgllmmvg
qrrrllrylqredperyralieklgirg

  • Chain 'P':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33P (P:)
mvkirlarfgskhnphyrivvtdarrkrdgkyiekigyydprkttpdwlkvdverarywl
svgaqptdtarrllrqagvfrqe

  • Chain 'Q':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33Q (Q:)
pkkvltgvvvsdkmqktvtvlverqfphplygkvikrskkylahdpeekyklgdvveiie
srpiskrkrfrvlrlvesgrmdlvekylirrqnyqslskrggka

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33R (R:)
psrkakvkatlgefdlrdyrnvevlkrflsetgkilprrrtglsgkeqrilaktikrari
lgllpfteklvrk

  • Chain 'S':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33S (S:)
prslkkgvfvddhllekvlelnakgekrliktwsrrstivpemvghtiavyngkqhvpvy
itenmvghklgefaptrtyr

  • Chain 'T':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33T (T:)
rnlsalkrhrqslkrrlrnkakksaiktlskkaiqlaqegkaeealkimrkaeslidkaa
kgstlhknaaarrksrlmrkvrqlleaagapliggglsa

  • Chain 'V':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1n33V (V:)
gkgdrrtrrgkiwrgtygkyrprk