PDB entry 1mji
View 1mji on RCSB PDB site
Description: detailed analysis of RNA-protein interactions within the bacterial ribosomal protein l5/5s rRNA complex
Class: ribosome
Keywords: ribosomal protein - 5S rRNA complex, RIBOSOME
Deposited on
2002-08-28, released
2003-01-21
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.21
AEROSPACI score: 0.3
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 50S ribosomal protein L5
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot P41201 (Start-181)
- modified residue (98)
- modified residue (154)
Domains in SCOPe 2.05: d1mjia_ - Chain 'B':
Compound: 50S ribosomal protein L5
Species: Thermus thermophilus [TaxId:274]
Database cross-references and differences (RAF-indexed):
- Uniprot P41201 (Start-181)
- modified residue (98)
- modified residue (154)
Domains in SCOPe 2.05: d1mjib_ - Chain 'C':
Compound: 5S rRNA fragment
Species: Escherichia coli [TaxId:562]
- Chain 'D':
Compound: 5S rRNA fragment
Species: Escherichia coli [TaxId:562]
- Heterogens: MG, K, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1mjiA (A:)
mpldvalkrkyyeevrpelirrfgyqnvwevprlekvvinqglgeakedarilekaaqel
alitgqkpavtrakksisnfklrkgmpiglrvtlrrdrmwiflekllnvalprirdfrgl
npnsfdgrgnynlglreqlifpeitydmvdalrgmdiavvttaetdeearallellgfpf
rk
Sequence, based on observed residues (ATOM records): (download)
>1mjiA (A:)
ldvalkrkyyeevrpelirrfgyqnvwevprlekvvinqglgeakedarilekaaqelal
itgqkpavtrakksisnfklrkgmpiglrvtlrrdrmwiflekllnvalprirdfrglnp
nsfdgrgnynlglreqlifpeitydmvdalrgmdiavvttaetdeearallellgfpfrk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1mjiB (B:)
mpldvalkrkyyeevrpelirrfgyqnvwevprlekvvinqglgeakedarilekaaqel
alitgqkpavtrakksisnfklrkgmpiglrvtlrrdrmwiflekllnvalprirdfrgl
npnsfdgrgnynlglreqlifpeitydmvdalrgmdiavvttaetdeearallellgfpf
rk
Sequence, based on observed residues (ATOM records): (download)
>1mjiB (B:)
dvalkrkyyeevrpelirrfgyqnvwevprlekvvinqglgeakedarilekaaqelali
tgqkpavtrakksisnfklrkgmpiglrvtlrrdrmwiflekllnvalprirdfrglnpn
sfdgrgnynlglreqlifpeitydmvdalrgmdiavvttaetdeearallellgfpfrk
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.