PDB entry 1mhc
View 1mhc on RCSB PDB site
Description: model of MHC class I h2-m3 with nonapeptide from rat nd1 refined at 2.3 angstroms resolution
Class: histocompatibility antigen/peptide
Keywords: histocompatibility antigen/peptide
Deposited on
1995-08-23, released
1996-01-29
The last revision prior to the SCOP 1.75 freeze date was dated
2003-04-01, with a file datestamp of
2007-06-04.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.19
AEROSPACI score: 0.45
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MHC class I antigen h2-m3
Species: Mus musculus
Gene: H2-M3 B2M
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1mhca1, d1mhca2 - Chain 'B':
Compound: MHC class I antigen h2-m3
Species: Mus musculus
Gene: H2-M3 B2M
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1mhcb_ - Chain 'C':
Compound: nonapeptide from rat nadh dehydrogenase
Species: RATTUS RATTUS
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: MHC class I antigen h2-m3
Species: Mus musculus
Gene: H2-M3 B2M
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1mhcd1, d1mhcd2 - Chain 'E':
Compound: MHC class I antigen h2-m3
Species: Mus musculus
Gene: H2-M3 B2M
Database cross-references and differences (RAF-indexed):
Domains in SCOP 1.75: d1mhce_ - Chain 'F':
Compound: nonapeptide from rat nadh dehydrogenase
Species: RATTUS RATTUS
Database cross-references and differences (RAF-indexed):
- Heterogens: NAG, FOR, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1mhcA (A:)
gshslryfhtavsrpgrgepqyisvgyvddvqfqrcdsieeiprmeprapwmekerpeyw
kelklkvkniaqsaranlrtllryynqseggshilqwmvscevgpdmrllgahyqaaydg
sdyitlnedlsswtavdmvsqitksrlesagtaeyfrayvegeclellhrflrngkeilq
radppkahvahhprpkgdvtlrcwalgfypaditltwqkdeedltqdmelvetrpsgdgt
fqkwaavvvpsgeeqrytcyvhheglteplalkwrshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1mhcA (A:)
gshslryfhtavsrpgrgepqyisvgyvddvqfqrcdsieeiprmeprapwmekerpeyw
kelklkvkniaqsaranlrtllryynqseggshilqwmvscevgpdmrllgahyqaaydg
sdyitlnedlsswtavdmvsqitksrlesagtaeyfrayvegeclellhrflrngkeilq
radppkahvahhprpkgdvtlrcwalgfypaditltwqkdeedltqdmelvetrpsgdgt
fqkwaavvvpsgeeqrytcyvhheglteplalkwrs
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>1mhcB (B:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1mhcD (D:)
gshslryfhtavsrpgrgepqyisvgyvddvqfqrcdsieeiprmeprapwmekerpeyw
kelklkvkniaqsaranlrtllryynqseggshilqwmvscevgpdmrllgahyqaaydg
sdyitlnedlsswtavdmvsqitksrlesagtaeyfrayvegeclellhrflrngkeilq
radppkahvahhprpkgdvtlrcwalgfypaditltwqkdeedltqdmelvetrpsgdgt
fqkwaavvvpsgeeqrytcyvhheglteplalkwrshhhhhh
Sequence, based on observed residues (ATOM records): (download)
>1mhcD (D:)
gshslryfhtavsrpgrgepqyisvgyvddvqfqrcdsieeiprmeprapwmekerpeyw
kelklkvkniaqsaranlrtllryynqseggshilqwmvscevgpdmrllgahyqaaydg
sdyitlnedlsswtavdmvsqitksrlesagtaeyfrayvegeclellhrflrngkeilq
radppkahvahhprpkgdvtlrcwalgfypaditltwqkdeedltqdmelvetrpsgdgt
fqkwaavvvpsgeeqrytcyvhheglteplalkwrs
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1mhcE (E:)
iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
- Chain 'F':
No sequence available.