PDB entry 1mdb

View 1mdb on RCSB PDB site
Description: CRYSTAL STRUCTURE OF DhbE IN COMPLEX WITH DHB-ADENYLATE
Class: ligase
Keywords: ligase, adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation
Deposited on 2002-08-07, released 2002-09-11
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: 0.217
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2,3-dihydroxybenzoate-AMP ligase
    Species: Bacillus subtilis [TaxId:1423]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d1mdba_
  • Heterogens: SO4, AMP, DBH, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1mdbA (A:)
mlkgftpwpdelaetyrkngcwagetfgdllrdraakygdriaitcgnthwsyreldtra
drlaagfqklgiqqkdrvvvqlpnikeffevifalfrlgalpvfalpshrsseityfcef
aeaaayiipdaysgfdyrslarqvqsklptlkniivageaeeflpledlhtepvklpevk
ssdvaflqlsggstglskliprthddyiyslkrsvevcwldhstvylaalpmahnyplss
pgvlgvlyaggrvvlspspspddafplierekvtitalvpplamvwmdaassrrddlssl
qvlqvggakfsaeaarrvkavfgctlqqvfgmaeglvnytrlddpeeiivntqgkpmspy
desrvwddhdrdvkpgetghlltrgpytirgyykaeehnaasftedgfyrtgdivrltrd
gyivvegrakdqinrggekvaaeevenhllahpavhdaamvsmpdqflgerscvfiiprd
eapkaaelkaflrerglaaykipdrvefvesfpqtgvgkvskkalreaisekllagfkk

    Sequence, based on observed residues (ATOM records): (download) 
    >1mdbA (A:)
mlkgftpwpdelaetyrkngcwagetfgdllrdraakygdriaitcgnthwsyreldtra
drlaagfqklgiqqkdrvvvqlpnikeffevifalfrlgalpvfalpshrsseityfcef
aeaaayiipdaysgfdyrslarqvqsklptlkniivageaeeflpledlhtepvklpevk
ssdvaflqlsggstglskliprthddyiyslkrsvevcwldhstvylaalpmahnyplss
pgvlgvlyaggrvvlspspspddafplierekvtitalvpplamvwmdaassrrddlssl
qvlqvggakfsaeaarrvkavfgctlqqvfgmaeglvnytrlddpeeiivntqgkpmspy
desrvwddhdrdvkpgetghlltrgpytirgyykaeehnaasftedgfyrtgdivrltrd
gyivvegrakdqinrggekvaaeevenhllahpavhdaamvsmpdqflgerscvfiiprd
eapkaaelkaflrerglaaykipdrvefvesfpqtgvgkvskkalreaisekllag