PDB entry 1m9x
View 1m9x on RCSB PDB site
Description: X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A,A88M,G89A Complex.
Class: Isomerase/Viral protein
Keywords: CAPSID, HIV-1, CYCLOPHILIN A, ROTAMASE, Isomerase/Viral protein COMPLEX
Deposited on
2002-07-30, released
2003-05-27
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.172
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: cyclophilin a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1m9xa_ - Chain 'B':
Compound: cyclophilin a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1m9xb_ - Chain 'C':
Compound: hiv-1 capsid
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: CA
Database cross-references and differences (RAF-indexed):
- Uniprot Q72497 (0-145)
- engineered (86-88)
- see remark 999 (119)
Domains in SCOPe 2.08: d1m9xc_ - Chain 'D':
Compound: hiv-1 capsid
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: CA
Database cross-references and differences (RAF-indexed):
- Uniprot Q72497 (Start-145)
- engineered (86-88)
- see remark 999 (119)
Domains in SCOPe 2.08: d1m9xd_ - Chain 'E':
Compound: cyclophilin a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1m9xe_ - Chain 'F':
Compound: cyclophilin a
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1m9xf_ - Chain 'G':
Compound: hiv-1 capsid
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: CA
Database cross-references and differences (RAF-indexed):
- Uniprot Q72497 (0-145)
- engineered (86-88)
- see remark 999 (119)
Domains in SCOPe 2.08: d1m9xg_ - Chain 'H':
Compound: hiv-1 capsid
Species: Human immunodeficiency virus 1 [TaxId:11676]
Gene: CA
Database cross-references and differences (RAF-indexed):
- Uniprot Q72497 (Start-145)
- engineered (86-88)
- see remark 999 (119)
Domains in SCOPe 2.08: d1m9xh_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>1m9xA (A:)
mvnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgf
mcqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictakte
wldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgqle
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1m9xB (B:)
mvnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgf
mcqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictakte
wldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgqle
Sequence, based on observed residues (ATOM records): (download)
>1m9xB (B:)
vnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgfm
cqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictaktew
ldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgqle
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>1m9xC (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvamapiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1m9xD (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvamapiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
Sequence, based on observed residues (ATOM records): (download)
>1m9xD (D:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvamapiapgqmreprgsdiagttstlqeqigwmthnppipvgeiyk
rwiilglnkivrmys
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>1m9xE (E:)
mvnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgf
mcqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictakte
wldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgqle
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1m9xF (F:)
mvnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgf
mcqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictakte
wldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgqle
Sequence, based on observed residues (ATOM records): (download)
>1m9xF (F:)
vnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgfm
cqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictaktew
ldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgqle
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>1m9xG (G:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvamapiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
- Chain 'H':
Sequence, based on SEQRES records: (download)
>1m9xH (H:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvamapiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys
Sequence, based on observed residues (ATOM records): (download)
>1m9xH (H:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvamapiapgqmreprgsdiagttstlqeqigwmthnppipvgeiyk
rwiilglnkivrmys