PDB entry 1m9e

View 1m9e on RCSB PDB site
Description: X-ray crystal structure of Cyclophilin A/HIV-1 CA N-terminal domain (1-146) M-type H87A Complex.
Class: Isomerase/Viral protein
Keywords: CAPSID, HIV-1, CYCLOPHILIN A, ISOMERASE, ROTAMASE, Isomerase/Viral protein COMPLEX
Deposited on 2002-07-28, released 2003-05-27
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.72 Å
R-factor: 0.178
AEROSPACI score: 0.52 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cyclophilin a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1m9ea_
  • Chain 'B':
    Compound: cyclophilin a
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1m9eb_
  • Chain 'C':
    Compound: hiv-1 capsid
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: CA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q72497 (0-145)
      • engineered (86)
      • see remark 999 (119)
    Domains in SCOPe 2.05: d1m9ec_
  • Chain 'D':
    Compound: hiv-1 capsid
    Species: Human immunodeficiency virus 1 [TaxId:11676]
    Gene: CA
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q72497 (Start-145)
      • engineered (86)
      • see remark 999 (119)
    Domains in SCOPe 2.05: d1m9ed_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m9eA (A:)
mvnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgf
mcqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictakte
wldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgql

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1m9eB (B:)
mvnptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgf
mcqggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictakte
wldgkhvvfgkvkegmniveamerfgsrngktskkitiadcgql

    Sequence, based on observed residues (ATOM records): (download) 
    >1m9eB (B:)
nptvffdiavdgeplgrvsfelfadkvpktaenfralstgekgfgykgscfhriipgfmc
qggdftrhngtggksiygekfedenfilkhtgpgilsmanagpntngsqffictaktewl
dgkhvvfgkvkegmniveamerfgsrngktskkitiadcgql

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m9eC (C:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvaagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1m9eD (D:)
pivqnlqgqmvhqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvg
ghqaamqmlketineeaaewdrlhpvaagpiapgqmreprgsdiagttstlqeqigwmth
nppipvgeiykrwiilglnkivrmys

    Sequence, based on observed residues (ATOM records): (download) 
    >1m9eD (D:)
hqaisprtlnawvkvveekafspevipmfsalsegatpqdlntmlntvgghqaamqmlke
tineeaaewdrlhpvaagpiapgqmreprgsdiagttstlqeqigwmthnppipvgeiyk
rwiilglnkivrmys