PDB entry 1m7u

View 1m7u on RCSB PDB site
Description: Crystal structure of a novel DNA-binding domain from Ndt80, a transcriptional activator required for meiosis in yeast
Class: transcription activator
Keywords: transcription activator, yeast protein, DNA-binding, meiosis
Deposited on 2002-07-22, released 2002-11-06
The last revision prior to the SCOP 1.73 freeze date was dated 2002-11-06, with a file datestamp of 2007-06-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.232
AEROSPACI score: 0.21 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NDT80 protein
    Species: Saccharomyces cerevisiae
    Gene: NDT80
    Database cross-references and differences (RAF-indexed):
    • Uniprot P38830
      • see remark 999 (154)
      • see remark 999 (166)
    Domains in SCOP 1.73: d1m7ua_
  • Chain 'B':
    Compound: NDT80 protein
    Species: Saccharomyces cerevisiae
    Gene: NDT80
    Database cross-references and differences (RAF-indexed):
    • Uniprot P38830
      • see remark 999 (154)
      • see remark 999 (166)
    Domains in SCOP 1.73: d1m7ub_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1m7uA (A:)
stlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvs
tfetancdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakrd
kgpqfcpsvcplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsll
fsypedsiqkvaryervqfassisvkkpfqqnkhfslhvilgavvdpdtfhgenpgipyd
elalkngskgmfvylqemktppliirgrspsn

    Sequence, based on observed residues (ATOM records): (download) 
    >1m7uA (A:)
vgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvstfetan
cdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakgpqfcpsv
cplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsllfsypedsiq
kvaryervqfassisvnkhfslhvilgavvdpdtfnpgipydelalkngskgmfvylqem
ktppliirg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1m7uB (B:)
stlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvs
tfetancdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakrd
kgpqfcpsvcplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsll
fsypedsiqkvaryervqfassisvkkpfqqnkhfslhvilgavvdpdtfhgenpgipyd
elalkngskgmfvylqemktppliirgrspsn

    Sequence, based on observed residues (ATOM records): (download) 
    >1m7uB (B:)
vgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvstfetan
cdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtcpsvcplvps
plpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsllfsypedsiqkvarye
rvqfasskhfslhvilgavvdpdtfhgenpgipydelalkngskgmfvylqemktpplii