PDB entry 1m6u
View 1m6u on RCSB PDB site
Description: Crystal Structure of a Novel DNA-binding domain from Ndt80, a Transcriptional Activator Required for Meiosis in Yeast
Class: transcription activator
Keywords: transcription activator, yeast protein, DNA-binding, meiosis
Deposited on
2002-07-17, released
2002-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.226
AEROSPACI score: 0.32
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: NDT80 protein
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: NDT80
Database cross-references and differences (RAF-indexed):
- Uniprot P38830
- see remark 999 (154)
- see remark 999 (166)
- see remark 999 (208)
Domains in SCOPe 2.08: d1m6ua_ - Chain 'B':
Compound: NDT80 protein
Species: Saccharomyces cerevisiae [TaxId:4932]
Gene: NDT80
Database cross-references and differences (RAF-indexed):
- Uniprot P38830
- see remark 999 (154)
- see remark 999 (166)
Domains in SCOPe 2.08: d1m6ub_ - Heterogens: SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1m6uA (A:)
stlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvs
tfetancdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakrd
kgpqfcpsvcplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsll
fsypedsiqkvaryervqfassisvkkpfqqnkhfslhvilgavvdpdtfhgenpgipyd
elalkngskgmfvylqemktppliirgrspsn
Sequence, based on observed residues (ATOM records): (download)
>1m6uA (A:)
fkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvstfet
ancdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakrdkgpq
fcpsvcplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsllfsyp
edsiqkvaryervqfassisvkkpfqqnkhfslhvilgavvdpdtfhgenpgipydelal
kngskgmfvylqemktppliirgrs
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1m6uB (B:)
stlqfkvgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvs
tfetancdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakrd
kgpqfcpsvcplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsll
fsypedsiqkvaryervqfassisvkkpfqqnkhfslhvilgavvdpdtfhgenpgipyd
elalkngskgmfvylqemktppliirgrspsn
Sequence, based on observed residues (ATOM records): (download)
>1m6uB (B:)
vgppfelvrdycpvveshtgrtldlriipridrgfdhideewvgykrnyftlvstfetan
cdldtflkssfdllvedssvesrlrvqyfaikikaknddddteinlvqhtakrdkgpqfc
psvcplvpsplpkhqiireasnvrnitktkkydstfylhrnhvnyeeygvdsllfsyped
siqkvaryervqfassikhfslhvilgavvdpdtfhgenpgipydelalkngskgmfvyl
qemktpplii