PDB entry 1m3j

View 1m3j on RCSB PDB site
Description: CRYSTAL form II of perfringolysin O
Class: toxin
Keywords: pore forming toxin
Deposited on 2002-06-28, released 2003-09-02
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 3 Å
R-factor: 0.247
AEROSPACI score: 0.15 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: perfringolysin O
    Species: Clostridium perfringens [TaxId:1502]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19995 (0-470)
      • see remark 999 (84)
    Domains in SCOPe 2.08: d1m3ja1, d1m3ja2
  • Chain 'B':
    Compound: perfringolysin O
    Species: Clostridium perfringens [TaxId:1502]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P19995 (0-470)
      • see remark 999 (84)
    Domains in SCOPe 2.08: d1m3jb1, d1m3jb2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m3jA (A:)
ditdknqsidsgisslsynrnevlasngdkiesfvpkegkkagnkfivverqkrslttsp
vdisiidsvndrtypgalqladkalvenrptilmvkrkpininidlpglkgensikvddp
tygkvsgaidelvskwnekyssthtlpartqysesmvysksqissalnvnakvlenslgv
dfnavannekkvmilaykqifytvsadlpknpsdlfddsvtfndlkqkgvsneapplmvs
nvaygrtiyvklettssskdvqaafkalikntdiknsqqykdiyenssftavvlggdaqe
hnkvvtkdfdeirkvikdnatfstknpaypisytsvflkdnsvaavhnktdyiettstey
skgkinldhsgayvaqfevawdevsydkegnevlthktwdgnyqdktahystvipleana
rnirikarectglawewwrdviseydvpltnninvsiwgttlypgssityn

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m3jB (B:)
ditdknqsidsgisslsynrnevlasngdkiesfvpkegkkagnkfivverqkrslttsp
vdisiidsvndrtypgalqladkalvenrptilmvkrkpininidlpglkgensikvddp
tygkvsgaidelvskwnekyssthtlpartqysesmvysksqissalnvnakvlenslgv
dfnavannekkvmilaykqifytvsadlpknpsdlfddsvtfndlkqkgvsneapplmvs
nvaygrtiyvklettssskdvqaafkalikntdiknsqqykdiyenssftavvlggdaqe
hnkvvtkdfdeirkvikdnatfstknpaypisytsvflkdnsvaavhnktdyiettstey
skgkinldhsgayvaqfevawdevsydkegnevlthktwdgnyqdktahystvipleana
rnirikarectglawewwrdviseydvpltnninvsiwgttlypgssityn