PDB entry 1m3d

View 1m3d on RCSB PDB site
Description: Structure of Type IV Collagen NC1 Domains
Class: structural protein
Keywords: Basement membrane, Type IV collagen, NC1 domain, Network assembly, 3D domain swapping, Br-MAD, STRUCTURAL PROTEIN
Deposited on 2002-06-27, released 2003-01-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.169
AEROSPACI score: 0.45 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3da1, d1m3da2
  • Chain 'B':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3db1, d1m3db2
  • Chain 'C':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha2
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dc1, d1m3dc2
  • Chain 'D':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dd1, d1m3dd2
  • Chain 'E':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3de1, d1m3de2
  • Chain 'F':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha2
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3df1, d1m3df2
  • Chain 'G':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dg1, d1m3dg2
  • Chain 'H':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dh1, d1m3dh2
  • Chain 'I':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha2
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3di1, d1m3di2
  • Chain 'J':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dj1, d1m3dj2
  • Chain 'K':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha1
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dk1, d1m3dk2
  • Chain 'L':
    Compound: Type IV Collagen Noncollagenous Domain- Alpha2
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1m3dl1, d1m3dl2
  • Heterogens: LU, BR, GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1m3dA (A:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dA (A:)
gflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpflf
cninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsqt
iqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcny
yanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmr

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1m3dB (B:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dB (B:)
flvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpflfc
ninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsqti
qipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcnyy
anaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1m3dC (C:)
isigyllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmp
flycnpgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsq
dvsiphcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtc
hyyankysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dC (C:)
yllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmpflyc
npgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsqdvsi
phcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtchyya
nkysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmkn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1m3dD (D:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dD (D:)
hgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpfl
fcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsq
tiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcn
yyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrr

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1m3dE (E:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dE (E:)
hgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpfl
fcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsq
tiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcn
yyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmr

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1m3dF (F:)
isigyllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmp
flycnpgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsq
dvsiphcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtc
hyyankysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dF (F:)
gyllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmpfly
cnpgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsqdvs
iphcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtchyy
ankysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmkn

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1m3dG (G:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dG (G:)
hgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpfl
fcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsq
tiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcn
yyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrr

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1m3dH (H:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dH (H:)
hgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpfl
fcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsq
tiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcn
yyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmr

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >1m3dI (I:)
isigyllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmp
flycnpgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsq
dvsiphcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtc
hyyankysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dI (I:)
yllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmpflyc
npgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsqdvsi
phcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtchyya
nkysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmkn

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >1m3dJ (J:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dJ (J:)
gflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpflf
cninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsqt
iqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcny
yanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmr

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >1m3dK (K:)
svdhgflvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstm
pflfcninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmav
hsqtiqipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrg
tcnyyanaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dK (K:)
flvtrhsqttddpqcppgtkilyhgysllyvqgnerahgqdlgtagsclrkfstmpflfc
ninnvcnfasrndysywlstpepmpmsmapitgenirpfisrcavceapamvmavhsqti
qipqcptgwsslwigysfvmhtsagaegsgqalaspgscleefrsapfiechgrgtcnyy
anaysfwlatiersemfkkptpstlkagelrthvsrcqvcmrrt

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >1m3dL (L:)
isigyllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmp
flycnpgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsq
dvsiphcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtc
hyyankysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmknl

    Sequence, based on observed residues (ATOM records): (download) 
    >1m3dL (L:)
yllvkhsqtdqepmcpvgmnklwsgysllyfegqekahnqdlglagsclarfstmpflyc
npgdvcyyasrndksywlsttaplpmmpvaeedirpyisrcsvceapavaiavhsqdvsi
phcpagwrslwigysflmhtaagdegggqslvspgscledfratpfiecngargtchyya
nkysfwlttipeqsfqgtpsadtlkaglirthisrcqvcmkn