PDB entry 1m2o

View 1m2o on RCSB PDB site
Description: Crystal Structure of the Sec23-Sar1 complex
Class: protein transport/signaling protein
Keywords: zinc-finger, beta barrel, vWA domain, gelsolin domain,, PROTEIN TRANSPORT-SIGNALING PROTEIN COMPLEX
Deposited on 2002-06-24, released 2002-09-20
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.238
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein transport protein SEC23
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Sec23
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1m2oa1, d1m2oa2, d1m2oa3, d1m2oa4, d1m2oa5
  • Chain 'B':
    Compound: GTP-binding protein SAR1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Sar1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1m2ob_
  • Chain 'C':
    Compound: protein transport protein SEC23
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Sec23
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1m2oc1, d1m2oc2, d1m2oc3, d1m2oc4, d1m2oc5
  • Chain 'D':
    Compound: GTP-binding protein SAR1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Sar1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d1m2od_
  • Heterogens: ZN, MG, GNP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1m2oA (A:)
mdfetnedingvrftwnvfpstrsdansnvvpvgclytplkeydelnvapynpvvcsgph
cksilnpycvidprnsswscpicnsrnhlppqytnlsqenmplelqsttieyitnkpvtv
ppifffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrcn
vfrgdreyqlealtemltgqkptgpggaashlpnamnkvtpfslnrfflpleqvefklnq
llenlspdqwsvpaghrplratgsalniaslllqgcyknipariilfasgpgtvapgliv
nselkdplrshhdidsdhaqhykkackfynqiaqrvaanghtvdifagcydqigmsemkq
ltdstggvllltdafstaifkqsylrlfakdeegylkmafngnmavktskdlkvqgligh
asavkktdanniseseigigatstwkmaslspyhsyaiffeiantaansnpmmsapgsad
rphlaytqfittyqhssgtnrirvttvanqllpfgtpaiaasfdqeaaavlmariavhka
etddgadvirwldrtliklcqkyadynkddpqsfrlapnfslypqftyylrrsqflsvfn
nspdetafyrhiftredttnslimiqptltsfsmeddpqpvlldsisvkpntillldtff
filiyhgeqiaqwrkagyqddpqyadfkalleepkleaaellvdrfplprfidteaggsq
arfllsklnpsdnyqdmarggstivltddvslqnfmthlqqvavsgqa

    Sequence, based on observed residues (ATOM records): (download) 
    >1m2oA (A:)
dfetnedingvrftwnvfpstrsdansnvvpvgclytplkeydelnvapynpvvcsgphc
ksilnpycvidprnsswscpicnsrnhlppqytnenmplelqsttieyitnkpvtvppif
ffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrcnvfrg
dreyqlealtemltgqkptvtpfslnrfflpleqvefklnqllenlspdqwsvpaghrpl
ratgsalniaslllqgcyknipariilfasgpgtvapglivnselkdplrshhdidsdha
qhykkackfynqiaqrvaanghtvdifagcydqigmsemkqltdstggvllltdafstai
fkqsylrlfakdeegylkmafngnmavktskdlkvqglighasavkktdanniseseigi
gatstwkmaslspyhsyaiffeianthlaytqfittyqhssgtnrirvttvanqllpfgt
paiaasfdqeaaavlmariavhkaetddgadvirwldrtliklcqkyadynkddpqsfrl
apnfslypqftyylrrsqflsvfnnspdetafyrhiftredttnslimiqptltsfsmed
dpqpvlldsisvkpntillldtfffiliyhgeqiaqwrkagyqddpqyadfkalleepkl
eaaellvdrfplprfidteaggsqarfllsklnpstivltddvslqnfmthlqqvavs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1m2oB (B:)
magwdifgwfrdvlaslglwnkhgkllflgldnagkttllhmlkndrlatlqptwhptse
elaignikfttfdlgghiqarrlwkdyfpevngivflvdaadperfdearveldalfnia
elkdvpfvilgnkidapnavseaelrsalgllnttgsqriegqrpvevfmcsvvmrngyl
eafqwlsqyi

    Sequence, based on observed residues (ATOM records): (download) 
    >1m2oB (B:)
gkllflgldnagkttllhmlkndrlatlqptwhptseelaignikfttfdlgghiqarrl
wkdyfpevngivflvdaadperfdearveldalfniaelkdvpfvilgnkidapnavsea
elrsalgllnttgiegqrpvevfmcsvvmrngyleafqwlsqyi

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1m2oC (C:)
mdfetnedingvrftwnvfpstrsdansnvvpvgclytplkeydelnvapynpvvcsgph
cksilnpycvidprnsswscpicnsrnhlppqytnlsqenmplelqsttieyitnkpvtv
ppifffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrcn
vfrgdreyqlealtemltgqkptgpggaashlpnamnkvtpfslnrfflpleqvefklnq
llenlspdqwsvpaghrplratgsalniaslllqgcyknipariilfasgpgtvapgliv
nselkdplrshhdidsdhaqhykkackfynqiaqrvaanghtvdifagcydqigmsemkq
ltdstggvllltdafstaifkqsylrlfakdeegylkmafngnmavktskdlkvqgligh
asavkktdanniseseigigatstwkmaslspyhsyaiffeiantaansnpmmsapgsad
rphlaytqfittyqhssgtnrirvttvanqllpfgtpaiaasfdqeaaavlmariavhka
etddgadvirwldrtliklcqkyadynkddpqsfrlapnfslypqftyylrrsqflsvfn
nspdetafyrhiftredttnslimiqptltsfsmeddpqpvlldsisvkpntillldtff
filiyhgeqiaqwrkagyqddpqyadfkalleepkleaaellvdrfplprfidteaggsq
arfllsklnpsdnyqdmarggstivltddvslqnfmthlqqvavsgqa

    Sequence, based on observed residues (ATOM records): (download) 
    >1m2oC (C:)
dfetnedingvrftwnvfpstrsdansnvvpvgclytplkeydelnvapynpvvcsgphc
ksilnpycvidprnsswscpicnsrnhlppqytnenmplelqsttieyitnkpvtvppif
ffvvdltsetenldslkesiitslsllppnaliglitygnvvqlhdlssetidrcnvfrg
dreyqlealtemltgqkptvtpfslnrfflpleqvefklnqllenlspdqwsvpaghrpl
ratgsalniaslllqgcyknipariilfasgpgtvapglivnselkdplrshhdidsdha
qhykkackfynqiaqrvaanghtvdifagcydqigmsemkqltdstggvllltdafstai
fkqsylrlfakdeegylkmafngnmavktskdlkvqglighasavkktdanniseseigi
gatstwkmaslspyhsyaiffeianthlaytqfittyqhssgtnrirvttvanqllpfgt
paiaasfdqeaaavlmariavhkaetddgadvirwldrtliklcqkyadynkddpqsfrl
apnfslypqftyylrrsqflsvfnnspdetafyrhiftredttnslimiqptltsfsmed
dpqpvlldsisvkpntillldtfffiliyhgeqiaqwrkagyqddpqyadfkalleepkl
eaaellvdrfplprfidteaggsqarfllsklnpstivltddvslqnfmthlqqvavs

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1m2oD (D:)
magwdifgwfrdvlaslglwnkhgkllflgldnagkttllhmlkndrlatlqptwhptse
elaignikfttfdlgghiqarrlwkdyfpevngivflvdaadperfdearveldalfnia
elkdvpfvilgnkidapnavseaelrsalgllnttgsqriegqrpvevfmcsvvmrngyl
eafqwlsqyi

    Sequence, based on observed residues (ATOM records): (download) 
    >1m2oD (D:)
gkllflgldnagkttllhmlkndrlatlqptwhptseelaignikfttfdlgghiqarrl
wkdyfpevngivflvdaadperfdearveldalfniaelkdvpfvilgnkidapnavsea
elrsalgllnttgrpvevfmcsvvmrngyleafqwlsq