PDB entry 1m11

View 1m11 on RCSB PDB site
Description: structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy
Class: Virus/Receptor
Keywords: decay-accelerating factor, SCR, Icosahedral virus
Deposited on 2002-06-17, released 2002-08-28
The last revision prior to the SCOP 1.75 freeze date was dated 2004-03-02, with a file datestamp of 2007-06-04.
Experiment type: EM
Resolution: 16 Å
R-factor: N/A
AEROSPACI score: -0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain '1':
    Compound: coat protein vp1
    Species: Human echovirus 7
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1m111_
  • Chain '2':
    Compound: coat protein vp2
    Species: Human echovirus 7
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1m112_
  • Chain '3':
    Compound: coat protein vp3
    Species: Human echovirus 7
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1m113_
  • Chain 'R':
    Compound: decay-accelerating factor
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOP 1.75: d1m11r_

PDB Chain Sequences:

  • Chain '1':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m111 (1:)
gdtetaidnaiarvadtvasgpsnstsipaltavetghtsqvepsdtmqtrhvknyhsrs
estvenflsrsacvyieeyytkdqdnvnrymswtinarrmvqlrrkfelftymrfdmeit
fvitsrqlpgtsiaqdmpplthqimyippggpvpnsvtdfawqtstnpsifwtegnappr
msipfisignaysnfydgwshfsqngvygynalnnmgklyarhvnkdtpyqmsstirvyf
kpkhirvwvprpprlspyikssnvnfnptnltderssi

  • Chain '2':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m112 (2:)
gysdrvrsltlgnstittqesanvvvgygrwpeylrddeataedqptqpdvatcrfytle
svqweknsagwwwkfpealkdmglfgqnmlyhylgragytihvqcnaskfhqgcllvvcv
peaemgcsqtdkevaamnltkgeaahkfeptkttgehtvqsivcnagmgvgvgnltiyph
qwinlrtnncativmpyvnsvpmdnmfrhynftlmvipfapldyaaqaseyvpvtvtiap
mcaeynglrlayqq

  • Chain '3':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m113 (3:)
gfpvlntpgsnqfmtsddfqspsampqfdvtphmdipgevhnlmeiaevdsvvpvnnikv
nlqsmdayhievntgnhqgekifafqmqpglesvfkrtlmgeilnyyahwsgsikltftf
cgsamatgklllaysppgadvpatrkqamlgthmiwdiglqsscvlcipwisqthyrlvq
qdeytsagnvtcwyqtgivvppgtpnkcvvlcfasacndfsvrmlrdtpfigqtallq

  • Chain 'R':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >1m11R (R:)
dcglppdvpnaqpalegrtsfpedtvitykceesfvkipgekdsviclkgsqwsdieefc
nrscevptrlnsaslkqpyitqnyfpvgtvveyecrpgyrrepslspkltclqnlkwsta
vefckkkscpnpgeirngqidvpggilfgatisfscntgyklfgstssfclisgssvqws
dplpecreiycpappqidngiiqgerdhygyrqsvtyacnkgftmigehsiyctvnndeg
ews