PDB entry 1lt9

View 1lt9 on RCSB PDB site
Description: Crystal Structure of Recombinant Human Fibrinogen Fragment D
Class: blood clotting
Keywords: blood coagulation, fibrinogen, fibrinogen fragment D, recombinant fibrinogen fragment D, recombinant fibrinogen, BLOOD CLOTTING
Deposited on 2002-05-20, released 2002-11-06
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Fibrinogen alpha/alpha-E Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lt9a_
  • Chain 'B':
    Compound: fibrinogen beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lt9b1, d1lt9b2
  • Chain 'C':
    Compound: Fibrinogen gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lt9c1, d1lt9c2
  • Chain 'D':
    Compound: Fibrinogen alpha/alpha-E Chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lt9d_
  • Chain 'E':
    Compound: fibrinogen beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lt9e1, d1lt9e2
  • Chain 'F':
    Compound: Fibrinogen gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1lt9f1, d1lt9f2
  • Heterogens: NAG, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1lt9A (A:)
viekvqhiqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkql
eqviak

    Sequence, based on observed residues (ATOM records): (download) 
    >1lt9A (A:)
viekvqhiqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkql
eqvia

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1lt9B (B:)
hqlyidetvnsniptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsg
keceeiirkggetsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdp
ykqgfgnvatntdgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahygg
ftvqneankyqisvnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwlts
dprkqcskedgggwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmr
kmsmkirpffpqq

    Sequence, based on observed residues (ATOM records): (download) 
    >1lt9B (B:)
iptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsgkeceeiirkgge
tsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdpykqgfgnvatnt
dgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahyggftvqneankyqi
svnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwltsdprkqcskedgg
gwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmrkmsmkirpff

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1lt9C (C:)
yeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqd
iankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegf
ghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyr
ltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgww
mnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrltig
egqqhhlggak

    Sequence, based on observed residues (ATOM records): (download) 
    >1lt9C (C:)
yeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqd
iankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegf
ghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyr
ltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgww
mnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrlti

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1lt9D (D:)
viekvqhiqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkql
eqviak

    Sequence, based on observed residues (ATOM records): (download) 
    >1lt9D (D:)
iqllqknvraqlvdmkrlevdidikirscrgscsralarevdlkdyedqqkqleqvia

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1lt9E (E:)
hqlyidetvnsniptnlrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsg
keceeiirkggetsemyliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdp
ykqgfgnvatntdgknycglpgeywlgndkisqltrmgptelliemedwkgdkvkahygg
ftvqneankyqisvnkyrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwlts
dprkqcskedgggwwynrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmr
kmsmkirpffpqq

    Sequence, based on observed residues (ATOM records): (download) 
    >1lt9E (E:)
lrvlrsilenlrskiqklesdvsaqmeycrtpctvscnipvvsgkeceeiirkggetsem
yliqpdssvkpyrvycdmntenggwtviqnrqdgsvdfgrkwdpykqgfgnvatntdgkn
ycglpgeywlgndkisqltrmgptelliemedwkgdkvkahyggftvqneankyqisvnk
yrgtagnalmdgasqlmgenrtmtihngmffstydrdndgwltsdprkqcskedgggwwy
nrchaanpngryywggqytwdmakhgtddgvvwmnwkgswysmrkmsmkirpff

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1lt9F (F:)
yeasilthdssirylqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqd
iankgakqsglyfikplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegf
ghlsptgttefwlgnekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyr
ltyayfaggdagdafdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgww
mnkchaghlngvyyqggtyskastpngydngiiwatwktrwysmkkttmkiipfnrltig
egqqhhlggak

    Sequence, based on observed residues (ATOM records): (download) 
    >1lt9F (F:)
lqeiynsnnqkivnlkekvaqleaqcqepckdtvqihditgkdcqdiankgakqsglyfi
kplkanqqflvyceidgsgngwtvfqkrldgsvdfkknwiqykegfghlsptgttefwlg
nekihlistqsaipyalrveledwngrtstadyamfkvgpeadkyrltyayfaggdagda
fdgfdfgddpsdkfftshngmqfstwdndndkfegncaeqdgsgwwmnkchaghlngvyy
qggtyskastpngydngiiwatwktrwysmkkttmkiipfnrlti