PDB entry 1lme
View 1lme on RCSB PDB site
Description: Crystal Structure of Peptide Deformylase from Thermotoga maritima
Class: hydrolase
Keywords: thermophile, PDF, peptide deformylase, metalloenzyme, deformylation, Structural Genomics, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, JCSG, HYDROLASE
Deposited on
2002-05-01, released
2003-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.198
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peptide deformylase
Species: Thermotoga maritima [TaxId:2336]
Database cross-references and differences (RAF-indexed):
- Uniprot P96113 (12-End)
- see remark 999 (3-11)
- modified residue (98)
Domains in SCOPe 2.08: d1lmea1, d1lmea2 - Chain 'B':
Compound: Peptide deformylase
Species: Thermotoga maritima [TaxId:2336]
Database cross-references and differences (RAF-indexed):
- Uniprot P96113 (12-End)
- see remark 999 (10-11)
- modified residue (98)
Domains in SCOPe 2.08: d1lmeb1, d1lmeb2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1lmeA (A:)
mgsdkihhhhhhmyrirvfgdpvlrkrakpvtkfdenlkktiermietmyhydgvglaap
qvgisqrffvmdvgngpvavinpeileidpetevaeegclsfpeifveierskrikvkyq
ntrgeyveeelegyaarvfqhefdhlngvliidrispakrlllrkklmdiartvkr
Sequence, based on observed residues (ATOM records): (download)
>1lmeA (A:)
dkihhhhhhmyrirvfgdpvlrkrakpvtkfdenlkktiermietmyhydgvglaapqvg
isqrffvmdvgngpvavinpeileidpetevaeegclsfpeifveierskrikvkyqntr
geyveeelegyaarvfqhefdhlngvliidrisp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1lmeB (B:)
mgsdkihhhhhhmyrirvfgdpvlrkrakpvtkfdenlkktiermietmyhydgvglaap
qvgisqrffvmdvgngpvavinpeileidpetevaeegclsfpeifveierskrikvkyq
ntrgeyveeelegyaarvfqhefdhlngvliidrispakrlllrkklmdiartvkr
Sequence, based on observed residues (ATOM records): (download)
>1lmeB (B:)
hhmyrirvfgdpvlrkrakpvtkfdenlkktiermietmyhydgvglaapqvgisqrffv
mdvgngpvavinpeileidpetevaeegclsfpeifveierskrikvkyqntrgeyveee
legyaarvfqhefdhlngvliidrisp