PDB entry 1ldp

View 1ldp on RCSB PDB site
Description: crystal structure of murine MHC class I h-2ld with a mixture of bound peptides
Class: complex (MHC I/peptide)
Keywords: COMPLEX (MHC I-PEPTIDE), MAJOR HISTOCOMPATIBILITY COMPLEX, IMMUNOLOGY, CELLULAR IMMUNITY, PEPTIDE ANTIGEN, CELL SURFACE RECEPTOR, ANTIGEN RECEPTOR, ANTIGEN PRESENTATION, COMPLEX (MHC I-PEPTIDE) complex
Deposited on 1998-03-15, released 1998-06-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-09.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: N/A
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: MHC class I h-2ld
    Species: Mus musculus [TaxId:10090]
    Gene: H-2LD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ldph1, d1ldph2
  • Chain 'L':
    Compound: MHC class I h-2ld
    Species: Mus musculus [TaxId:10090]
    Gene: H-2LD
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1ldpl_
  • Chain 'P':
    Compound: peptide
    Species: Drosophila melanogaster [TaxId:7227]
    Database cross-references and differences (RAF-indexed):
    • PDB 1LDP (0-8)
  • Chain 'Q':
    Compound: peptide
    Species: Drosophila melanogaster [TaxId:7227]
    Database cross-references and differences (RAF-indexed):
    • PDB 1LDP (0-8)
  • Heterogens: NAG

PDB Chain Sequences:

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ldpH (H:)
    gphsmryfetavsrpglgepryisvgyvdnkefvrfdsdaenpryepqapwmeqegpeyw
    eritqiakgqeqwfrvnlrtllgyynqsaggthtlqwmygcdvgsdgrllrgyeqfaydg
    cdyialnedlktwtaadmaaqitrrkweqagaaeyyraylegecvewlhrylkngnatll
    rtdspkahvthhprskgevtlrcwalgfypaditltwqlngeeltqdmelvetrpagdgt
    fqkwasvvvplgkeqnytcrvyheglpepltl
    

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >1ldpL (L:)
    iqktpqiqvysrhppengkpnilncyvtqfhpphieiqmlkngkkipkvemsdmsfskdw
    sfyilahteftptetdtyacrvkhdsmaepktvywdrdm
    

  • Chain 'P':
    No sequence available.

  • Chain 'Q':
    No sequence available.