PDB entry 1l9v
View 1l9v on RCSB PDB site
Description: Non Structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssRNA binding and nucleic acid helix-destabilizing protein
Class: Viral protein
Keywords: alpha/beta protein, HIT-like fold, Octamer, Two domain protein, Viral protein
Deposited on
2002-03-26, released
2002-06-05
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.241
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Rotavirus-NSP2
Species: Simian 11 rotavirus (serotype 3 / strain SA11-Ramig) [TaxId:36435]
Gene: gene segment 8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d1l9va1, d1l9va2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1l9vA (A:)
maelacfcyphlendsykfipfnnlaikamltakvdkkdmdkfydsiiygiapppqfkkr
yntndnsrgmnfetimftkvamlicealnslkvtqanvsnvlsrvvsirhlenlvirken
pqdilfhskdlllkstliaigqskeiettitaeggeivfqnaaftmwkltylehqlmpil
dqnfieykvtlnedkpisdvhvkelvaelrwqynkfavithgkghyrivkyssvanhadr
vyatfksnvktgvnndfnlldqriiwqnwyaftssmkqgntldvckrllfqkmkpeknpf
kglstdrkmdevsqvgv
Sequence, based on observed residues (ATOM records): (download)
>1l9vA (A:)
maelacfcyphlendsykfipfnnlaikamltakvdkkdmdkfydsiiygiapppqfkkr
yntndnsrgmnfetimftkvamlicealnslkvtqanvsnvlsrvvsirhlenlvirken
pqdilfhskdlllkstliaigqskeiettitaeggeivfqnaaftmwkltylehqlmpil
dqnfieykvtlnedkpisdvhvkelvaelrwqynkfavithgkghyrivkyssvanhadr
vyatfksnvktgvnndfnlldqriiwqnwyaftssmkqgntldvckrllfqkmkpeknpf
kglstdrkmdevs