PDB entry 1l9v

View 1l9v on RCSB PDB site
Description: Non Structural protein encoded by gene segment 8 of rotavirus (NSP2), an NTPase, ssRNA binding and nucleic acid helix-destabilizing protein
Class: Viral protein
Keywords: alpha/beta protein, HIT-like fold, Octamer, Two domain protein, Viral protein
Deposited on 2002-03-26, released 2002-06-05
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.241
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Rotavirus-NSP2
    Species: Simian 11 rotavirus (serotype 3 / strain SA11-Ramig) [TaxId:36435]
    Gene: gene segment 8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1l9va1, d1l9va2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1l9vA (A:)
    maelacfcyphlendsykfipfnnlaikamltakvdkkdmdkfydsiiygiapppqfkkr
    yntndnsrgmnfetimftkvamlicealnslkvtqanvsnvlsrvvsirhlenlvirken
    pqdilfhskdlllkstliaigqskeiettitaeggeivfqnaaftmwkltylehqlmpil
    dqnfieykvtlnedkpisdvhvkelvaelrwqynkfavithgkghyrivkyssvanhadr
    vyatfksnvktgvnndfnlldqriiwqnwyaftssmkqgntldvckrllfqkmkpeknpf
    kglstdrkmdevsqvgv
    

    Sequence, based on observed residues (ATOM records): (download)
    >1l9vA (A:)
    maelacfcyphlendsykfipfnnlaikamltakvdkkdmdkfydsiiygiapppqfkkr
    yntndnsrgmnfetimftkvamlicealnslkvtqanvsnvlsrvvsirhlenlvirken
    pqdilfhskdlllkstliaigqskeiettitaeggeivfqnaaftmwkltylehqlmpil
    dqnfieykvtlnedkpisdvhvkelvaelrwqynkfavithgkghyrivkyssvanhadr
    vyatfksnvktgvnndfnlldqriiwqnwyaftssmkqgntldvckrllfqkmkpeknpf
    kglstdrkmdevs