PDB entry 1l9h

View 1l9h on RCSB PDB site
Description: Crystal structure of bovine rhodopsin at 2.6 angstroms RESOLUTION
Class: signaling protein
Keywords: g protein-coupled receptor, membrane protein, retinal protein, photoreceptor, signaling protein
Deposited on 2002-03-23, released 2002-05-15
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.188
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: rhodopsin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1l9ha_
  • Chain 'B':
    Compound: rhodopsin
    Species: Bos taurus [TaxId:9913]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d1l9hb_
  • Heterogens: BNG, HG, ZN, HTO, PLM, RET, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1l9hA (A:)
mngtegpnfyvpfsnktgvvrspfeapqyylaepwqfsmlaaymfllimlgfpinfltly
vtvqhkklrtplnyillnlavadlfmvfggftttlytslhgyfvfgptgcnlegffatlg
geialwslvvlaieryvvvckpmsnfrfgenhaimgvaftwvmalacaapplvgwsryip
egmqcscgidyytpheetnnesfviymfvvhfiipliviffcygqlvftvkeaaaqqqes
attqkaekevtrmviimviaflicwlpyagvafyifthqgsdfgpifmtipaffaktsav
ynpviyimmnkqfrncmvttlccgknplgddeasttvsktetsqvapa

    Sequence, based on observed residues (ATOM records): (download) 
    >1l9hA (A:)
mngtegpnfyvpfsnktgvvrspfeapqyylaepwqfsmlaaymfllimlgfpinfltly
vtvqhkklrtplnyillnlavadlfmvfggftttlytslhgyfvfgptgcnlegffatlg
geialwslvvlaieryvvvckpmsnfrfgenhaimgvaftwvmalacaapplvgwsryip
egmqcscgidyytpheetnnesfviymfvvhfiipliviffcygqlvftvkeaaaattqk
aekevtrmviimviaflicwlpyagvafyifthqgsdfgpifmtipaffaktsavynpvi
yimmnkqfrncmvttlccgknplgdsttvsktetsqvapa

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1l9hB (B:)
mngtegpnfyvpfsnktgvvrspfeapqyylaepwqfsmlaaymfllimlgfpinfltly
vtvqhkklrtplnyillnlavadlfmvfggftttlytslhgyfvfgptgcnlegffatlg
geialwslvvlaieryvvvckpmsnfrfgenhaimgvaftwvmalacaapplvgwsryip
egmqcscgidyytpheetnnesfviymfvvhfiipliviffcygqlvftvkeaaaqqqes
attqkaekevtrmviimviaflicwlpyagvafyifthqgsdfgpifmtipaffaktsav
ynpviyimmnkqfrncmvttlccgknplgddeasttvsktetsqvapa

    Sequence, based on observed residues (ATOM records): (download) 
    >1l9hB (B:)
mngtegpnfyvpfsnktgvvrspfeapqyylaepwqfsmlaaymfllimlgfpinfltly
vtvqhkklrtplnyillnlavadlfmvfggftttlytslhgyfvfgptgcnlegffatlg
geialwslvvlaieryvvvcgenhaimgvaftwvmalacaapplvgwsryipegmqcscg
idyytpheetnnesfviymfvvhfiipliviffcygqlqkaekevtrmviimviaflicw
lpyagvafyifthqgsdfgpifmtipaffaktsavynpviyimmnkqfrncmvttlccgk
n