PDB entry 1kyv
View 1kyv on RCSB PDB site
Description: Lumazine Synthase from S.pombe bound to riboflavin
Class: transferase
Keywords: riboflavin biosynthesis, lumazine synthase, Schizosaccharomyces pombe, ligand binding, TRANSFERASE
Deposited on
2002-02-06, released
2002-07-24
The last revision prior to the SCOPe 2.07 freeze date was dated
2013-01-23, with a file datestamp of
2013-01-18.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.18
AEROSPACI score: 0.38
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: 6,7-dimethyl-8-ribityllumazine synthase
Species: Schizosaccharomyces pombe [TaxId:4896]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1kyva_ - Chain 'B':
Compound: 6,7-dimethyl-8-ribityllumazine synthase
Species: Schizosaccharomyces pombe [TaxId:4896]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1kyvb_ - Chain 'C':
Compound: 6,7-dimethyl-8-ribityllumazine synthase
Species: Schizosaccharomyces pombe [TaxId:4896]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1kyvc_ - Chain 'D':
Compound: 6,7-dimethyl-8-ribityllumazine synthase
Species: Schizosaccharomyces pombe [TaxId:4896]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1kyvd_ - Chain 'E':
Compound: 6,7-dimethyl-8-ribityllumazine synthase
Species: Schizosaccharomyces pombe [TaxId:4896]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d1kyve_ - Heterogens: PO4, RBF, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1kyvA (A:)
mfsgikgpnpsdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvp
gswelpqgirasiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilg
lltvlneeqalyraglngghnhgndwgsaavemglkaly
Sequence, based on observed residues (ATOM records): (download)
>1kyvA (A:)
dlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvpgswelpqgira
siarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilglltvlneeqal
yraglngghnhgndwgsaavemglkal
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1kyvB (B:)
mfsgikgpnpsdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvp
gswelpqgirasiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilg
lltvlneeqalyraglngghnhgndwgsaavemglkaly
Sequence, based on observed residues (ATOM records): (download)
>1kyvB (B:)
dlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvpgswelpqgira
siarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilglltvlneeqal
yraglngghnhgndwgsaavemglkal
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1kyvC (C:)
mfsgikgpnpsdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvp
gswelpqgirasiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilg
lltvlneeqalyraglngghnhgndwgsaavemglkaly
Sequence, based on observed residues (ATOM records): (download)
>1kyvC (C:)
sdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvpgswelpqgir
asiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilglltvlneeqa
lyraglngghnhgndwgsaavemglkaly
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1kyvD (D:)
mfsgikgpnpsdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvp
gswelpqgirasiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilg
lltvlneeqalyraglngghnhgndwgsaavemglkaly
Sequence, based on observed residues (ATOM records): (download)
>1kyvD (D:)
dlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvpgswelpqgira
siarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilglltvlneeqal
yraglngghnhgndwgsaavemglkal
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1kyvE (E:)
mfsgikgpnpsdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvp
gswelpqgirasiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilg
lltvlneeqalyraglngghnhgndwgsaavemglkaly
Sequence, based on observed residues (ATOM records): (download)
>1kyvE (E:)
gpnpsdlkgpelrilivharwnlqaieplvkgavetmiekhdvklenidiesvpgswelp
qgirasiarntydavigigvlikgstmhfeyiseavvhglmrvgldsgvpvilglltvln
eeqalyraglngghnhgndwgsaavemglkal