PDB entry 1kri

View 1kri on RCSB PDB site
Description: NMR Solution Structures of the Rhesus Rotavirus VP4 Sialic Acid Binding Domain without Ligand
Class: viral protein
Keywords: rotavirus, VP4, VP8*, spike protein, outer capsid, sialic acid, hemagglutinin, cell attachment, neutralization antigen, lectin, galectin fold, Viral protein
Deposited on 2002-01-09, released 2002-03-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-05, with a file datestamp of 2020-01-31.
Experiment type: NMR
Resolution: N/A
R-factor: N/A
AEROSPACI score: 0.02 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: vp4
    Species: Rotavirus A [TaxId:10969]
    Gene: segment 4
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1kria_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >1kriA (A:)
    apvnwgpgetndsttvepvldgpyqpttfnppvdywmllaptaagvvvegtnntdrwlat
    ilvepnvtsetrsytlfgtqeqitianasqtqwkfidvvkttqngsysqygplqstpkly
    avmkhngkiytyngetpnvttkyysttnydsvnmtafcdfyiipreeestcteyinnglp
    piqntr
    

    Sequence, based on observed residues (ATOM records): (download)
    >1kriA (A:)
    ldgpyqpttfnppvdywmllaptaagvvvegtnntdrwlatilvepnvtsetrsytlfgt
    qeqitianasqtqwkfidvvkttqngsysqygplqstpklyavmkhngkiytyngetpnv
    ttkyysttnydsvnmtafcdfyiipreeestcteyinngl